Construct: ORF TRCN0000487747
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF019535.1_s317c1
- DNA Barcode:
- CGATCCGAGCTATAACGGGTCGGG
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- FPR1 (2357)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000487747
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2357 | FPR1 | formyl peptide receptor 1 | NM_001193306.2 | 99.8% | 99.7% | 993C>T;1050_1051insG |
| 2 | human | 2357 | FPR1 | formyl peptide receptor 1 | NM_002029.3 | 99.8% | 99.7% | 993C>T;1050_1051insG |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 63
- ORF end:
- 1116
- ORF length:
- 1053
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaagcca 61 ccatggagac aaattcctct ctccccacga acatctctgg agggacacct gctgtatctg 121 ctggctatct cttcctggat atcatcactt atctggtatt tgcagtcacc tttgtcctcg 181 gggtcctggg caacgggctt gtgatctggg tggctggatt ccggatgaca cacacagtca 241 ccaccatcag ttacctgaac ctggccgtgg ctgacttctg tttcacctcc actttgccat 301 tcttcatggt caggaaggcc atgggaggac attggccttt cggctggttc ctgtgcaaat 361 tcgtctttac catagtggac atcaacttgt tcggaagtgt cttcctgatc gccctcattg 421 ctctggaccg ctgtgtttgc gtcctgcatc cagtctggac ccagaaccac cgcaccgtga 481 gcctggccaa gaaggtgatc attgggccct gggtgatggc tctgctcctc acattgccag 541 ttatcattcg tgtgactaca gtacctggta aaacggggac agtagcctgc acttttaact 601 tttcgccctg gaccaacgac cctaaagaga ggataaatgt ggccgttgcc atgttgacgg 661 tgagaggcat catccggttc atcattggct tcagcgcacc catgtccatc gttgctgtca 721 gttatgggct tattgccacc aagatccaca agcaaggctt gattaagtcc agtcgtccct 781 tacgggtcct ctcctttgtc gcagcagcct tttttctctg ctggtcccca tatcaggtgg 841 tggcccttAT AGCCACAGTC AGAATCCGTG AGTTATTGCA AGGCATGTAC AAAGAAATTG 901 GTATTGCAGT GGATGTGACA AGTGCCCTGG CCTTCTTCAA CAGCTGCCTC AACCCCATGC 961 TCTATGTCTT CATGGGCCAG GACTTCCGGG AGAGGCTGAT CCACGCCCTT CCCGCCAGTC 1021 TGGAGAGGGC CCTGACCGAG GACTCAACCC AAACTAGTGA CACAGCTACC AATTCTACTT 1081 TACCTTCTGC AGAGGTGGAG TTACAGGCAA AGGACCCAGC TTTCTTGTAC AAAGTGGTTG 1141 ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA 1201 GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGACG 1261 ATCCGAGCTA TAACGGGTCG GGACGCGTTA AGTCgacaat caacctctgg attacaaaat 1321 ttgtgaaaga tt