Construct: ORF TRCN0000487791
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF021158.1_s317c1
- DNA Barcode:
- CTGGACCACGATCCCTTGTGGTTG
- Epitope Tag:
- V5 (not translated due to prior stop codon)
- Notes:
- Has stop codon in insert
Originally Annotated References:
- Gene:
- MLNR (2862)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000487791
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2862 | MLNR | motilin receptor | NM_001507.1 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 72
- ORF end:
- 1308
- ORF length:
- 1236
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcac catgggcagc ccctggaacg gcagcgacgg ccccgagggg gcgcgggagc 121 cgccgtggcc cgcgctgccg ccttgcgacg agcgccgctg ctcgcccttt cccctggggg 181 cgctggtgcc ggtgaccgct gtgtgcctgt gcctgttcgt cgtcggggtg agcggcaacg 241 tggtgaccgt gatgctgatc gggcgctacc gggacatgcg gaccaccacc aacttgtacc 301 tgggcagcat ggccgtgtcc gacctactca tcctgctcgg gctgccgttc gacctgtacc 361 gcctctggcg ctcgcggccc tgggtgttcg ggccgctgct ctgccgcctg tccctctacg 421 tgggcgaggg ctgcacctac gccacgctgc tgcacatgac cgcgctcagc gtcgagcgct 481 acctggccat ctgccgcccg ctccgcgccc gcgtcttggt cacccggcgc cgcgtccgcg 541 cgctcatcgc tgtgctctgg gccgtggcgc tgctctctgc cggtcccttc ttgttcctgg 601 tgggcgtcga gcaggacccc ggcatctccg tagtcccggg cctcaatggc accgcgcgga 661 tcgcctcctc gcctctcgcc tcgtcgccgc ctctctggct ctcgcgggcg ccaccgccgt 721 ccccgccgtc ggggcccgag accgcggagg ccgcggcgct gttcagccgc gaatgccggc 781 cgagccccgc gcagctgggc gcgctgcgtg tcatgctgtg ggtcaccacc gcctacttct 841 tcctgccctt tctgtgcctc agcatcctct acgggctcat cgggcgggag ctgtggagca 901 gccggcggcc gctgcgaggc ccggccgcct cggggcggga gagaggccac cggcagaccg 961 tccgcgtcct gctggtggtg gttctggcat ttataatttg ctggttgccc ttccacgttG 1021 GCAGAATCAT TTACATAAAC ACGGAAGATT CGCGGATGAT GTACTTCTCT CAGTACTTTA 1081 ACATCGTCGC TCTGCAACTT TTCTATCTGA GCGCATCTAT CAACCCAATC CTCTACAACC 1141 TCATTTCAAA GAAGTACAGA GCGGCGGCCT TTAAACTGCT GCTCGCAAGG AAGTCCAGGC 1201 CGAGAGGCTT CCACAGAAGC AGGGACACTG CGGGGGAAGT TGCAGGGGAC ACTGGAGGAG 1261 ACACGGTGGG CTACACCGAG ACAAGCGCTA ACGTGAAGAC GATGGGATAA GACCCAGCTT 1321 TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT 1381 CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT 1441 CTTGTGGAAA GGACGACTGG ACCACGATCC CTTGTGGTTG ACGCGTTAAG TCgacaatca 1501 acctctggat tacaaaattt gtgaaagatt