Construct: ORF TRCN0000488451

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021452.1_s317c1
DNA Barcode:
CCTATTGGGGTCCAACTGGTGCCT
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
AURKC (6795)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488451
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6795 AURKC aurora kinase C NM_003160.3 99% 100% 825_826insTGAAAGCT
2 human 6795 AURKC aurora kinase C NM_001015879.2 93.9% 94.8% 1_45del;870_871insTGAAAGCT
3 human 6795 AURKC aurora kinase C NM_001015878.2 88.2% 88.9% 1_102del;927_928insTGAAAGCT
4 human 6795 AURKC aurora kinase C XR_430209.3 41.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
891
ORF length:
825
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaagaat
61tcaccatgcg gcgcctcaca gtcgatgact ttgaaatcgg gcgtcccctg ggcaagggga
121aatttgggaa tgtgtacctg gctcggctca aggaaagcca tttcattgtg gccctgaagg
181ttctcttcaa gtcgcagata gagaaggaag gactggagca ccagctgcgc cgggaaattg
241agatccaggc tcatctacaa caccccaata tcctgcgcct gtataactat ttccatgatg
301cacgccgggt gtacctgatt ctggaatatg ctccaagggg tgagctctac aaggagctgc
361agaaaagcga gaaattagat gaacagcgca cagccacgat aatagaggag ttggcagatg
421ccctgaccta ctgccatgac aagaaagtga ttcacagaga tattaagcca gagaacctgc
481tgctggggtt caggggtgag gtgaagattg cagattttgg ctggtctgtg cacaccccct
541cccTGAGGAG GAAGACAATG TGTGGGACAC TGGACTACTT GCCGCCAGAA ATGATTGAGG
601GGAGAACATA TGATGAAAAG GTGGATTTGT GGTGCATTGG AGTGCTCTGC TATGAGCTGC
661TGGTGGGATA TCCACCCTTT GAGAGCGCCT CCCACAGTGA GACTTACAGA CGCATCCTCA
721AGGTAGATGT GAGGTTTCCA CTATCAATGC CTCTGGGGGC CCGGGACTTG ATTTCCAGGC
781TTCTCAGATA CCAGCCCTTG GAGAGACTGC CCCTGGCCCA GATCCTGAAG CACCCCTGGG
841TTCAGGCCCA CTCCCGAAGG GTGCTGCCTC CCTGTGCTCA GATGGCTTCC TGAAAGCTTG
901ACCCAGCTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
961GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1021TTTATATATC TTGTGGAAAG GACGACCTAT TGGGGTCCAA CTGGTGCCTA CGCGTTAAGT
1081Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)

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