Construct: ORF TRCN0000489199

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019707.1_s317c1
DNA Barcode:
TGCTTCACGCTCCGGTAATGGCCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC10A1 (6554)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489199
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6554 SLC10A1 solute carrier family 10 me... NM_003049.4 99.8% 99.7% 225G>A;1047_1048insG
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
75
ORF end:
1125
ORF length:
1050
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcgc caccatggag gcccacaacg cgtctgcccc attcaacttc accctgccac
121ccaactttgg caagcgcccc acagacctgg cactgagcgt catcctggtg ttcatgttgt
181tcttcatcat gctctcgctg ggctgcacca tggagttcag caagatcaag gctcacttat
241ggaagcctaa agggctggcc atcgccctgg tggcacagta tggcatcatg cccctcacag
301cctttgtgct gggcaaggtc ttccggctga agaacattga ggcactggcc atcttggtct
361gtggctgctc acctggaggg aacctgtcca atgtcttcag tctggccatg aagggggaca
421tgaacctcag cattgtgatg accacctgct ccaccttctg tgcccttggc atgatgcctc
481tcctcctgta catctactcc agggggatct atgatgggga cctgaaggac aaggtgccct
541ataaaggcat cgtgatatca ctggtcctgg ttctcattcc ttgcaccata gggatcgtcc
601tcaaatccaa acggccacaa tacatgcgct atgtcatcaa gggagggatg atcatcattc
661tcttgtgcag tgtggccgtc acagttctct ctgccatcaa tgtggggaag agcatcatgt
721ttgccatgac accactcttg attgccacct cctccctgat gCCTTTTATT GGCTTTCTGC
781TGGGTTATGT TCTCTCTGCT CTCTTCTGCC TCAATGGACG GTGCAGACGC ACTGTCAGCA
841TGGAGACTGG ATGCCAAAAT GTCCAACTCT GTTCCACCAT CCTCAATGTG GCCTTTCCAC
901CTGAAGTCAT TGGACCACTT TTCTTCTTTC CCCTCCTCTA CATGATTTTC CAGCTTGGAG
961AAGGGCTTCT CCTCATTGCC ATATTTTGGT GCTATGAGAA ATTCAAGACT CCCAAGGATA
1021AAACAAAAAT GATCTACACA GCTGCCACAA CTGAAGAAAC AATTCCAGGA GCTCTGGGAA
1081ATGGCACCTA CAAAGGGGAG GACTGCTCCC CTTGCACAGC CGACCCAGCT TTCTTGTACA
1141AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1201AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1261AGGACGATGC TTCACGCTCC GGTAATGGCC CACGCGTTAA GTCgacaatc aacctctgga
1321ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)

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