Construct: ORF TRCN0000489404

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020153.1_s317c1
DNA Barcode:
TATTGTCACACATTCGCACCCTGG
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
TAF9 (6880)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489404
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 102157402 AK6 adenylate kinase 6 NM_016283.5 100% 100%
2 human 102157402 AK6 adenylate kinase 6 NM_001015891.2 97% 92.6% (many diffs)
3 mouse 102216272 Ak6 adenylate kinase 6 NM_027592.3 86.6% 87.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
588
ORF length:
516
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgttgctt ccgaacatcc tgctcaccgg tacaccaggg gttggaaaaa
121ccacactagg caaagaactt gCGTCAAAAT CAGGACTGAA ATACATTAAT GTGGGTGATT
181TAGCTCGAGA AGAGCAATTG TATGATGGCT ATGATGAAGA GTATGACTGT CCCATTTTAG
241ATGAAGACAG AGTAGTTGAT GAGTTAGATA ACCAAATGAG AGAAGGTGGA GTTATTGTTG
301ATTACCATGG TTGTGATTTC TTCCCTGAAC GCTGGTTTCA TATAGTTTTT GTGCTGAGAA
361CAGATACCAA TGTATTGTAC GAAAGACTTG AAACAAGGGG TTATAATGAG AAGAAACTAA
421CAGACAATAT TCAGTGTGAG ATTTTTCAAG TTCTTTATGA AGAAGCCACA GCATCCTACA
481AGGAAGAAAT CGTGCATCAG CTGCCCAGTA ATAAACCAGA AGAGCTAGAA AATAATGTAG
541ATCAGATCTT GAAATGGATT GAGCAGTGGA TCAAAGATCA TAACTCTTGA GACCCAGCTT
601TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
661CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
721CTTGTGGAAA GGACGATATT GTCACACATT CGCACCCTGG ACGCGTTAAG TCgacaatca
781acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)

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