Construct: ORF TRCN0000489835

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019786.1_s317c1
DNA Barcode:
TAACCTGCGCCGCTAGTTGCTCCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AURKC (6795)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489835
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6795 AURKC aurora kinase C NM_003160.3 99.8% 99.6% 825_826insG
2 human 6795 AURKC aurora kinase C NM_001015879.2 94.7% 94.5% 1_45del;870_871insG
3 human 6795 AURKC aurora kinase C NM_001015878.2 88.9% 88.7% 1_102del;927_928insG
4 human 6795 AURKC aurora kinase C XR_430209.3 41.2% 1_1034del;1367_1371delGGTGA;1865_2000delinsG
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
900
ORF length:
828
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgcggcgc ctcacagtcg atgactttga aatcgggcgt cccctgggca
121aggggaaatt tgggaatgtg tacctggctc ggctcaagga aagccatttc attgtggccc
181tgaaggttct cttcaagtcg cagatagaga aggaaggact ggagcaccag ctgcgccggg
241aaattgagat ccaggctcat ctacaacacc ccaatatcct gcgcctgtat aactatttcc
301atgatgcacg ccgggtgtac ctgattctgg aatatgctcc aaggggtgag ctctacaagg
361agctgcagaa aagcgagaaa ttagatgaac agcgcacagc cacgataata gaggagttgg
421cagatgccct gacctactgc catgacaaga aagtgattca cagagatatt aagccagaga
481acctgctgct ggggttcagg ggtgaggtga agattgcaga ttttggctgg tctgtgcaca
541ccccctccct gaggaggaag acaatgtgtg ggacactgga ctacttgccg ccagaaatga
601ttgaggggag aacatatgat gaaaaggtgg atttgtggtg cattggagtg ctctgctatg
661agctgctggt gggatatcca ccctttgaga gcgcctccca cagtgagact tacagacgca
721tcctcaaggt agatgtgagg tttccactat caatgcctct gggggcccgg gacttgattt
781ccaggcttct cagataccag cccttggaga gacTGCCCCT GGCCCAGATC CTGAAGCACC
841CCTGGGTTCA GGCCCACTCC CGAAGGGTGC TGCCTCCCTG TGCTCAGATG GCTTCCGACC
901CAGCTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
961TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1021ATATATCTTG TGGAAAGGAC GATAACCTGC GCCGCTAGTT GCTCCGACGC GTTAAGTCga
1081caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)

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