Construct: ORF TRCN0000491476
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF019256.2_s317c1
- DNA Barcode:
- GACTCTTAGGATCTTCTGACCTAT
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- MLNR (2862)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000491476
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2862 | MLNR | motilin receptor | NM_001507.1 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 75
- ORF end:
- 1311
- ORF length:
- 1236
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcgc caccatgggc agcccctgga acggcagcga cggccccgag ggggcgcggg 121 agccgccgtg gcccgcgctg ccgccttgcg acgagcgccg ctgctcgccc tttcccctgg 181 gggcgctggt gccggtgacc gctgtgtgcc tgtgcctgtt cgtcgtcggg gtgagcggca 241 acgtggtgac cgtgatgctg atcgggcgct accgggacat gcggaccacc accaacttgt 301 acctgggcag catggccgtg tccgacctac tcatcctgct cgggctgccg ttcgacctgt 361 accgcctctg gcgctcgcgg ccctgggtgt tcgggccgct gctctgccgc ctgtccctct 421 acgtgggcga gggctgcacc tacgccacgc tgctgcacat gaccgcgctc agcgtcgagc 481 gctacctggc catctgccgc ccgctccgcg cccgcgtctt ggtcacccgg cgccgcgtcc 541 gcgcgctcat cgctgtgctc tgggccgtgg cgctgctctc tgccggtccc ttcttgttcc 601 tggtgggcgt cgagcaggac cccggcatct ccgtagtccc gggcctcaat ggcaccgcgc 661 ggatcgcctc ctcgcctctc gcctcgtcgc cgcctctctg gctctcgcgg gcgccaccgc 721 cgtccccgcc gtcggggccc gagaccgcgg aggccgcggc gctgttcagc cgcgaatgcc 781 ggccgagccc cgcgcagctg ggcgcgctgc gtgtcatgct gtgggtcacc accgcctact 841 tcttcctgcc ctttctgtgc ctcagcatcc tctacgggct catcgggcgg gagctgtgga 901 gcagccggcg gccgctgcga ggcccggccg cctcggggcg ggagagaggc caccggcaga 961 ccgtccgcgt cctgctggtg gtggttctgg catttataat ttgctgGTTG CCCTTCCACG 1021 TTGGCAGAAT CATTTACATA AACACGGAAG ATTCGCGGAT GATGTACTTC TCTCAGTACT 1081 TTAACATCGT CGCTCTGCAA CTTTTCTATC TGAGCGCATC TATCAACCCA ATCCTCTACA 1141 ACCTCATTTC AAAGAAGTAC AGAGCGGCGG CCTTTAAACT GCTGCTCGCA AGGAAGTCCA 1201 GGCCGAGAGG CTTCCACAGA AGCAGGGACA CTGCGGGGGA AGTTGCAGGG GACACTGGAG 1261 GAGACACGGT GGGCTACACC GAGACAAGCG CTAACGTGAA GACGATGGGA GACCCAGCTT 1321 TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT 1381 CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT 1441 CTTGTGGAAA GGACGAGACT CTTAGGATCT TCTGACCTAT ACGCGTTAAG TCgacaatca 1501 acctctggat tacaaaattt gtgaaagatt