Construct: ORF ccsbBroad304_00336

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004745.1_s304c1, BRDN0000408769
Derived from:
ccsbBroadEn_00336
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CNGA3 (1261)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00336
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1261 CNGA3 cyclic nucleotide gated cha... NM_001298.3 100% 100%
2 human 1261 CNGA3 cyclic nucleotide gated cha... NM_001079878.2 97.4% 97.2% 395_396ins54
3 human 1261 CNGA3 cyclic nucleotide gated cha... XM_011510554.2 92.6% 92.6% 213_377del
4 human 1261 CNGA3 cyclic nucleotide gated cha... XM_006712243.2 90.2% 90.1% 213_377del;560_561ins54
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2151
ORF length:
2082
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggccaagatc aacacccaat actcccaccc ctccaggacc cacctcaagg
121taaagacctc agaccgagat ctcaatcgcg ctgaaaatgg cctcagcaga gcccactcgt
181caagtgagga gacatcgtca gtgctgcagc cggggatcgc catggagacc agaggactgg
241ctgactccgg gcagggctcc ttcaccggcc aggggatcgc caggctgtcg cgcctcatct
301tcttgctgcg caggtgggct gccaggcatg tgcaccacca ggaccaggga ccggactctt
361ttcctgatcg tttccgtgga gccgagctta aggaggtgtc cagccaagaa agcaatgccc
421aggcaaatgt gggcagccag gagccagcag acagagggag aagcgcctgg cccctggcca
481aatgcaacac taacaccagc aacaacacgg aggaggagaa gaagacgaaa aagaaggatg
541cgatcgtggt ggacccgtcc agcaacctgt actaccgctg gctgaccgcc atcgccctgc
601ctgtcttcta taactggtat ctgcttattt gcagggcctg tttcgatgag ctgcagtccg
661agtacctgat gctgtggctg gtcctggact actcggcaga tgtcctgtat gtcttggatg
721tgcttgtacg agctcggaca ggttttctcg agcaaggctt aatggtcagt gataccaaca
781ggctgtggca gcattacaag acgaccacgc agttcaagct ggatgtgttg tccctggtcc
841ccaccgacct ggcttactta aaggtgggca caaactaccc agaagtgagg ttcaaccgcc
901tactgaagtt ttcccggctc tttgaattct ttgaccgcac agagacaagg accaactacc
961ccaatatgtt caggattggg aacttggtct tgtacattct catcatcatc cactggaatg
1021cctgcatcta ctttgccatt tccaagttca ttggttttgg gacagactcc tgggtctacc
1081caaacatctc aatcccagag catgggcgcc tctccaggaa gtacatttac agtctctact
1141ggtccacctt gacccttacc accattggtg agaccccacc ccccgtgaaa gatgaggagt
1201atctctttgt ggtcgtagac ttcttggtgg gtgttctgat ttttgccacc attgtgggca
1261atgtgggctc catgatctcg aatatgaatg cctcacgggc agagttccag gccaagattg
1321attccatcaa gcagtacatg cagttccgca aggtcaccaa ggacttggag acgcgggtta
1381tccggtggtt tgactacctg tgggccaaca agaagacggt ggatgagaag gaggtgctca
1441agagcctccc agacaagctg aaggctgaga tcgccatcaa cgtgcacctg gacacgctga
1501agaaggttcg catcttccag gactgtgagg cagggctgct ggtggagctg gtgctgaagc
1561tgcgacccac tgtgttcagc cctggggatt atatctgcaa gaagggagat attgggaagg
1621agatgtacat catcaacgag ggcaagctgg ccgtggtggc tgatgatggg gtcacccagt
1681tcgtggtcct cagcgatggc agctacttcg gggagatcag cattctgaac atcaagggga
1741gcaagtcggg gaaccgcagg acggccaaca tccgcagcat tggctactca gacctgttct
1801gcctctcaaa ggacgatctc atggaggccc tcaccgagta ccccgaagcc aagaaggccc
1861tggaggagaa aggacggcag atcctgatga aagacaacct gatcgatgag gagctggcca
1921gggcgggcgc ggaccccaag gaccttgagg agaaagtgga gcagctgggg tcctccctgg
1981acaccctgca gaccaggttt gcacgcctcc tggctgagta caacgccacc cagatgaaga
2041tgaagcagcg tctcagccaa ctggaaagcc aggtgaaggg tggtggggac aagcccctgg
2101ctgatgggga agttcccggg gatgctacaa aaacagagga caaacaacag ttgccaactt
2161tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
2221agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

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