Construct: ORF ccsbBroad304_00429

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009991.1_s304c1, BRDN0000398877
Derived from:
ccsbBroadEn_00429
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AKR1C2 (1646)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00429
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1646 AKR1C2 aldo-keto reductase family ... NM_001354.5 100% 100%
2 human 1646 AKR1C2 aldo-keto reductase family ... NM_205845.2 100% 100%
3 human 1645 AKR1C1 aldo-keto reductase family ... NM_001353.6 98% 97.8% (many diffs)
4 human 1646 AKR1C2 aldo-keto reductase family ... NM_001321027.1 91.9% 91.9% 367_368ins78
5 human 8644 AKR1C3 aldo-keto reductase family ... NM_001253908.1 91.4% 86.6% (many diffs)
6 human 8644 AKR1C3 aldo-keto reductase family ... NM_003739.6 91.2% 86.9% (many diffs)
7 human 1645 AKR1C1 aldo-keto reductase family ... XM_017015791.2 89.9% 89.7% (many diffs)
8 human 1109 AKR1C4 aldo-keto reductase family ... NM_001818.4 88.3% 81.7% (many diffs)
9 human 1646 AKR1C2 aldo-keto reductase family ... NM_001135241.2 41.7% 38.1% (many diffs)
10 human 8644 AKR1C3 aldo-keto reductase family ... NM_001253909.2 37.4% 34.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1035
ORF length:
969
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ttcgaaatac cagtgtgtga agctgaatga tggtcacttc atgcctgtcc
121tgggatttgg cacctatgcg cctgcagagg ttcctaaaag taaagctcta gaggccgtca
181aattggcaat agaagccggg ttccaccata ttgattctgc acatgtttac aataatgagg
241agcaggttgg actggccatc cgaagcaaga ttgcagatgg cagtgtgaag agagaagaca
301tattctacac ttcaaagctt tggagcaatt cccatcgacc agagttggtc cgaccagcct
361tggaaaggtc actgaaaaat cttcaattgg actatgttga cctctatctt attcattttc
421cagtgtctgt aaagccaggt gaggaagtga tcccaaaaga tgaaaatgga aaaatactat
481ttgacacagt ggatctctgt gccacatggg aggccatgga gaagtgtaaa gatgcaggat
541tggccaagtc catcggggtg tccaacttca accacaggct gctggagatg atcctcaaca
601agccagggct caagtacaag cctgtctgca accaggtgga atgtcatcct tacttcaacc
661agagaaaact gctggatttc tgcaagtcaa aagacattgt tctggttgcc tatagtgctc
721tgggatccca tcgagaagaa ccatgggtgg acccgaactc cccggtgctc ttggaggacc
781cagtcctttg tgccttggca aaaaagcaca agcgaacccc agccctgatt gccctgcgct
841accagctgca gcgtggggtt gtggtcctgg ccaagagcta caatgagcag cgcatcagac
901agaacgtgca ggtgtttgaa ttccagttga cttcagagga gatgaaagcc atagatggcc
961taaacagaaa tgtgcgatat ttgacccttg atatttttgc tggcccccct aattatccat
1021tttctgatga atattaccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1081ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1141cgacaatcaa cctctggatt a

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