Construct: ORF ccsbBroad304_00597
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF004649.1_s304c1, BRDN0000461149
- Derived from:
- ccsbBroadEn_00597
- DNA Barcode:
- None
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- FUT1 (2523)
Vector Information:
- Vector Backbone:
- pLX_304
- Pol II Cassette 1:
- PGK-BlastR
- Pol II Cassette 2:
- CMV-ccsbBroad304_00597
- Selection Marker:
- BlastR
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2523 | FUT1 | fucosyltransferase 1 (H blo... | NM_000148.3 | 100% | 100% | |
| 2 | human | 2523 | FUT1 | fucosyltransferase 1 (H blo... | NM_001329877.1 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 1164
- ORF length:
- 1095
- Sequence:
-
1 ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag 61 ttggcaccat gtggctccgg agccatcgtc agctctgcct ggccttcctg ctagtctgtg 121 tcctctctgt aatcttcttc ctccatatcc atcaagacag ctttccacat ggcctaggcc 181 tgtcgatcct gtgtccagac cgccgcctgg tgacaccccc agtggccatc ttctgcctgc 241 cgggtactgc gatgggcccc aacgcctcct cttcctgtcc ccagcaccct gcttccctct 301 ccggcacctg gactgtctac cccaatggcc ggtttggtaa tcagatggga cagtatgcca 361 cgctgctggc tctggcccag ctcaacggcc gccgggcctt tatcctgcct gccatgcatg 421 ccgccctggc cccggtattc cgcatcaccc tgcccgtgct ggccccagaa gtggacagcc 481 gcacgccgtg gcgggagctg cagcttcacg actggatgtc ggaggagtac gcggacttga 541 gagatccttt cctgaagctc tctggcttcc cctgctcttg gactttcttc caccatctcc 601 gggaacagat ccgcagagag ttcaccctgc acgaccacct tcgggaagag gcgcagagtg 661 tgctgggtca gctccgcctg ggccgcacag gggaccgccc gcgcaccttt gtcggcgtcc 721 acgtgcgccg tggggactat ctgcaggtta tgcctcagcg ctggaagggt gtggtgggcg 781 acagcgccta cctccggcag gccatggact ggttccgggc acggcacgaa gcccccgttt 841 tcgtggtcac cagcaacggc atggagtggt gtaaagaaaa catcgacacc tcccagggcg 901 atgtgacgtt tgctggcgat ggacaggagg ctacaccgtg gaaagacttt gccctgctca 961 cacagtgcaa ccacaccatt atgaccattg gcaccttcgg cttctgggct gcctacctgg 1021 ctggcggaga cactgtctac ctggccaact tcaccctgcc agactctgag ttcctgaaga 1081 tctttaagcc ggaggcggcc ttcctgcccg agtgggtggg cattaatgca gacttgtctc 1141 cactctggac attggctaag cctttgccaa ctttcttgta caaagtggtt ggtaagccta 1201 tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc 1261 gcgttaagtc gacaatcaac ctctggatta