Construct: ORF ccsbBroad304_00691

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010475.1_s304c1, BRDN0000401889
Derived from:
ccsbBroadEn_00691
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GRIN2A (2903)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00691
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2903 GRIN2A glutamate ionotropic recept... NM_001134408.2 100% 100%
2 human 2903 GRIN2A glutamate ionotropic recept... XM_011522461.3 100% 100%
3 human 2903 GRIN2A glutamate ionotropic recept... XM_017023173.1 96% 96% 1_156del
4 human 2903 GRIN2A glutamate ionotropic recept... NM_000833.5 87.5% 86.4% 3769_4111del;4187_4392del
5 human 2903 GRIN2A glutamate ionotropic recept... NM_001134407.3 87.5% 86.4% 3769_4111del;4187_4392del
6 human 2903 GRIN2A glutamate ionotropic recept... XM_017023172.1 84.4% 83.5% 1_156del;3925_4267del;4343_4548del
7 human 2903 GRIN2A glutamate ionotropic recept... XM_011522458.3 76.7% 75.7% 0_1ins471;3298_3640del;3716_3921del
8 mouse 14811 Grin2a glutamate receptor, ionotro... NM_008170.2 77.5% 82.7% (many diffs)
9 mouse 14811 Grin2a glutamate receptor, ionotro... XM_006521794.3 77.5% 82.7% (many diffs)
10 mouse 14811 Grin2a glutamate receptor, ionotro... XM_006521795.3 50.2% 54.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3912
ORF length:
3843
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gggcagagtg ggctattgga ccctgctggt gctgccggcc cttctggtct
121ggcgcggtcc ggcgccgagc gcggcggcgg agaagggtcc ccccgcgcta aatattgcgg
181tgatgctggg tcacagccac gacgtgacag agcgcgaact tcgaacactg tggggccccg
241agcaggcggc ggggctgccc ctggacgtga acgtggtagc tctgctgatg aaccgcaccg
301accccaagag cctcatcacg cacgtgtgcg acctcatgtc cggggcacgc atccacggcc
361tcgtgtttgg ggacgacacg gaccaggagg ccgtagccca gatgctggat tttatctcct
421cccacacctt cgtccccatc ttgggcattc atgggggcgc atctatgatc atggctgaca
481aggatccgac gtctaccttc ttccagtttg gagcgtccat ccagcagcaa gccacggtca
541tgctgaagat catgcaggat tatgactggc atgtcttctc cctggtgacc actatcttcc
601ctggctacag ggaattcatc agcttcgtca agaccacagt ggacaacagc tttgtgggct
661gggacatgca gaatgtgatc acactggaca cttcctttga ggatgcaaag acacaagtcc
721agctgaagaa gatccactct tctgtcatct tgctctactg ttccaaagac gaggctgttc
781tcattctgag tgaggcccgc tcccttggcc tcaccgggta tgatttcttc tggattgtcc
841ccagcttggt ctctgggaac acggagctca tcccaaaaga gtttccatcg ggactcattt
901ctgtctccta cgatgactgg gactacagcc tggaggcgag agtgagggac ggcattggca
961tcctaaccac cgctgcatct tctatgctgg agaagttctc ctacatcccc gaggccaagg
1021ccagctgcta cgggcagatg gagaggccag aggtcccgat gcacaccttg cacccattta
1081tggtcaatgt tacatgggat ggcaaagact tatccttcac tgaggaaggc taccaggtgc
1141accccaggct ggtggtgatt gtgctgaaca aagaccggga atgggaaaag gtgggcaagt
1201gggagaacca tacgctgagc ctgaggcacg ccgtgtggcc caggtacaag tccttctccg
1261actgtgagcc ggatgacaac catctcagca tcgtcaccct ggaggaggcc ccattcgtca
1321tcgtggaaga catagacccc ctgaccgaga cgtgtgtgag gaacaccgtg ccatgtcgga
1381agttcgtcaa aatcaacaat tcaaccaatg aggggatgaa tgtgaagaaa tgctgcaagg
1441ggttctgcat tgatattctg aagaagcttt ccagaactgt gaagtttact tacgacctct
1501atctggtgac caatgggaag catggcaaga aagttaacaa tgtgtggaat ggaatgatcg
1561gtgaagtggt ctatcaacgg gcagtcatgg cagttggctc gctcaccatc aatgaggaac
1621gttctgaagt ggtggacttc tctgtgccct ttgtggaaac gggaatcagt gtcatggttt
1681caagaagtaa tggcaccgtc tcaccttctg cttttctaga accattcagc gcctctgtct
1741gggtgatgat gtttgtgatg ctgctcattg tttctgccat agctgttttt gtctttgaat
1801acttcagccc tgttggatac aacagaaact tagccaaagg gaaagcaccc catgggcctt
1861cttttacaat tggaaaagct atatggcttc tttggggcct ggtgttcaat aactccgtgc
1921ctgtccagaa tcctaaaggg accaccagca agatcatggt atctgtatgg gccttcttcg
1981ctgtcatatt cctggctagc tacacagcca atctggctgc cttcatgatc caagaggaat
2041ttgtggacca agtgaccggc ctcagtgaca aaaagtttca gagacctcat gactattccc
2101caccttttcg atttgggaca gtgcctaatg gaagcacgga gagaaacatt cggaataact
2161atccctacat gcatcagtac atgaccaaat ttaatcagaa aggagtagag gacgccttgg
2221tcagcctgaa aacggggaag ctggacgctt tcatctacga tgccgcagtc ttgaattaca
2281aggctgggag ggatgaaggc tgcaagctgg tgaccatcgg gagtgggtac atctttgcca
2341ccaccggtta tggaattgcc cttcagaaag gctctccttg gaagaggcag atcgacctgg
2401ccttgcttca gtttgtgggt gatggtgaga tggaggagct ggagaccctg tggctcactg
2461ggatctgcca caacgagaag aacgaggtga tgagcagcca gctggacatt gacaacatgg
2521cgggcgtatt ctacatgctg gctgccgcca tggcccttag cctcatcacc ttcatctggg
2581agcacctctt ctactggaag ctgcgcttct gtttcacggg cgtgtgctcc gaccggcctg
2641ggttgctctt ctccatcagc aggggcatct acagctgcat tcatggagtg cacattgaag
2701aaaagaagaa gtctccagac ttcaatctga cgggatccca gagcaacatg ttaaaactcc
2761tccggtcagc caaaaacatt tccagcatgt ccaacatgaa ctcctcaaga atggactcac
2821ccaaaagagc tgctgacttc atccaaagag gttccctcat catggacatg gtttcagata
2881aggggaattt gatgtactca gacaacaggt cctttcaggg gaaagagagc atttttggag
2941acaacatgaa cgaactccaa acatttgtgg ccaaccggca gaaggataac ctcaataact
3001atgtattcca gggacaacat cctcttactc tcaatgagtc caaccctaac acggtggagg
3061tggccgtgag cacagaatcc aaagcgaact ctagaccccg gcagctgtgg aagaaatccg
3121tggattccat acgccaggat tcactatccc agaatccagt ctcccagagg gatgaggcaa
3181cagcagagaa taggacccac tccctaaaga gccctaggta tcttccagaa gagatggccc
3241actctgacat ttcagaaacg tcaaatcggg ccacgtgcca cagggaacct gacaacagta
3301agaaccacaa aaccaaggac aactttaaaa ggtcagtggc ctccaaatac cccaaggact
3361gtagtgaggt cgagcgcacc tacctgaaaa ccaaatcaag ctcccctaga gacaagatct
3421acactataga tggtgagaag gagcctggtt tccacttaga tccaccccag tttgttgaaa
3481atgtgaccct gcccgagaac gtggacttcc cggaccccta ccaggatccc agtgaaaact
3541tccgcaaggg ggactccacg ctgccaatga accggaaccc cttgcataat gaagaggggc
3601tttccaacaa cgaccagtat aaactctact ccaagcactt caccttgaaa gacaagggtt
3661ccccgcacag tgagaccagc gagcgatacc ggcagaactc cacgcactgc agaagctgcc
3721tttccaacat gcccacctat tcaggccact tcaccatgag gtcccccttc aagtgcgatg
3781cctgcctgcg gatggggaac ctctatgaca tcgatgaaga ccagatgctt caggagacag
3841ggatgaccaa cgcttggtta ttgggagatg cccctcggac ccttacaaac actcgttgcc
3901atcccaggcg gttgccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
3961tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
4021caatcaacct ctggatta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.