Construct: ORF ccsbBroad304_00968

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005552.1_s304c1, BRDN0000409234
Derived from:
ccsbBroadEn_00968
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MAGEA9 (4108)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00968
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 728269 MAGEA9B MAGE family member A9B NM_001080790.1 100% 100%
2 human 4108 MAGEA9 MAGE family member A9 NM_005365.4 100% 100%
3 human 4108 MAGEA9 MAGE family member A9 XM_005262334.3 100% 100%
4 human 4108 MAGEA9 MAGE family member A9 XM_005262335.3 100% 100%
5 human 728269 MAGEA9B MAGE family member A9B XM_005278192.3 100% 100%
6 human 728269 MAGEA9B MAGE family member A9B XM_005278193.3 100% 100%
7 human 4108 MAGEA9 MAGE family member A9 XM_024452381.1 100% 100%
8 human 4108 MAGEA9 MAGE family member A9 XM_024452382.1 100% 100%
9 human 728269 MAGEA9B MAGE family member A9B XM_024452436.1 100% 100%
10 human 728269 MAGEA9B MAGE family member A9B XM_024452437.1 100% 100%
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1011
ORF length:
945
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tctcgagcag aggagtccgc actgcaagcc tgatgaagac cttgaagccc
121aaggagagga cttgggcctg atgggtgcac aggaacccac aggcgaggag gaggagacta
181cctcctcctc tgacagcaag gaggaggagg tgtctgctgc tgggtcatca agtcctcccc
241agagtcctca gggaggcgct tcctcctcca tttccgtcta ctacacttta tggagccaat
301tcgatgaggg ctccagcagt caagaagagg aagagccaag ctcctcggtc gacccagctc
361agctggagtt catgttccaa gaagcactga aattgaaggt ggctgagttg gttcatttcc
421tgctccacaa atatcgagtc aaggagccgg tcacaaaggc agaaatgctg gagagcgtca
481tcaaaaatta caagcgctac tttcctgtga tcttcggcaa agcctccgag ttcatgcagg
541tgatctttgg cactgatgtg aaggaggtgg accccgccgg ccactcctac atccttgtca
601ctgctcttgg cctctcgtgc gatagcatgc tgggtgatgg tcatagcatg cccaaggccg
661ccctcctgat cattgtcctg ggtgtgatcc taaccaaaga caactgcgcc cctgaagagg
721ttatctggga agcgttgagt gtgatggggg tgtatgttgg gaaggagcac atgttctacg
781gggagcccag gaagctgctc acccaagatt gggtgcagga aaactacctg gagtaccggc
841aggtgcccgg cagtgatcct gcgcactacg agttcctgtg gggttccaag gcccacgctg
901aaaccagcta tgagaaggtc ataaattatt tggtcatgct caatgcaaga gagcccatct
961gctacccatc cctttatgaa gaggttttgg gagaggagca agagggagtc tgcccaactt
1021tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1081agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)

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