Construct: ORF ccsbBroad304_01688

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011546.1_s304c1, BRDN0000403545
Derived from:
ccsbBroadEn_01688
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TNFRSF1A (7132)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01688
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7132 TNFRSF1A TNF receptor superfamily me... NM_001065.4 100% 100%
2 human 7132 TNFRSF1A TNF receptor superfamily me... NM_001346091.2 76.2% 76.2% 0_1ins324
3 human 7132 TNFRSF1A TNF receptor superfamily me... NM_001346092.2 62.8% 57.4% (many diffs)
4 human 7132 TNFRSF1A TNF receptor superfamily me... NR_144351.2 59.4% 1_262del;813_814ins74;1554_2097del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1431
ORF length:
1365
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg cctctccacc gtgcctgacc tgctgctgcc actggtgctc ctggagctgt
121tggtgggaat atacccctca ggggttattg gactggtccc tcacctaggg gacagggaga
181agagagatag tgtgtgtccc caaggaaaat atatccaccc tcaaaataat tcgatttgct
241gtaccaagtg ccacaaagga acctacttgt acaatgactg tccaggcccg gggcaggata
301cggactgcag ggagtgtgag agcggctcct tcaccgcttc agaaaaccac ctcagacact
361gcctcagctg ctccaaatgc cgaaaggaaa tgggtcaggt ggagatctct tcttgcacag
421tggaccggga caccgtgtgt ggctgcagga agaaccagta ccggcattat tggagtgaaa
481accttttcca gtgcttcaat tgcagcctct gcctcaatgg gaccgtgcac ctctcctgcc
541aggagaaaca gaacaccgtg tgcacctgcc atgcaggttt ctttctaaga gaaaacgagt
601gtgtctcctg tagtaactgt aagaaaagcc tggagtgcac gaagttgtgc ctaccccaga
661ttgagaatgt taagggcact gaggactcag gcaccacagt gctgttgccc ctggtcattt
721tctttggtct ttgcctttta tccctcctct tcattggttt aatgtatcgc taccaacggt
781ggaagtccaa gctctactcc attgtttgtg ggaaatcgac acctgaaaaa gagggggagc
841ttgaaggaac tactactaag cccctggccc caaacccaag cttcagtccc actccaggct
901tcacccccac cctgggcttc agtcccgtgc ccagttccac cttcacctcc agctccacct
961atacccccgg tgactgtccc aactttgcgg ctccccgcag agaggtggca ccaccctatc
1021agggggctga ccccatcctt gcgacagccc tcgcctccga ccccatcccc aacccccttc
1081agaagtggga ggacagcgcc cacaagccac agagcctaga cactgatgac cccgcgacgc
1141tgtacgccgt ggtggagaac gtgcccccgt tgcgctggaa ggaattcgtg cggcgcctag
1201ggctgagcga ccacgagatc gatcggctgg agctgcagaa cgggcgctgc ctgcgcgagg
1261cgcaatacag catgctggcg acctggaggc ggcgcacgcc gcggcgcgag gccacgctgg
1321agctgctggg acgcgtgctc cgcgacatgg acctgctggg ctgcctggag gacatcgagg
1381aggcgctttg cggccccgcc gccctcccgc ccgcgcccag tcttctcaga tgcccaactt
1441tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1501agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)

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