Construct: ORF ccsbBroad304_01802

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002017.1_s304c1, BRDN0000403757
Derived from:
ccsbBroadEn_01802
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MZF1 (7593)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01802
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7593 MZF1 myeloid zinc finger 1 NM_003422.2 100% 100%
2 human 7593 MZF1 myeloid zinc finger 1 NM_198055.2 100% 100%
3 human 7593 MZF1 myeloid zinc finger 1 XM_011527264.3 96% 96% 1_90del
4 human 7593 MZF1 myeloid zinc finger 1 XM_005259204.3 94.7% 94.7% 1_123del
5 human 7593 MZF1 myeloid zinc finger 1 XM_024451689.1 94.7% 94.7% 1_123del
6 human 7593 MZF1 myeloid zinc finger 1 XM_017027206.1 61.3% 61.3% 0_1ins852
7 human 7593 MZF1 myeloid zinc finger 1 NM_001267033.2 39.5% 36.5% 766_767ins244;870_871ins1088
8 mouse 109889 Mzf1 myeloid zinc finger 1 NM_001290452.1 62.1% 63.3% (many diffs)
9 mouse 109889 Mzf1 myeloid zinc finger 1 NM_001290453.1 54.9% 57.3% (many diffs)
10 mouse 109889 Mzf1 myeloid zinc finger 1 XM_011250413.2 45.6% 49.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2268
ORF length:
2202
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag gcctgcggtg ctgggctccc cagaccgagc acccccagaa gatgaggggc
121ctgtcatggt gaagctagag gactctgagg aggagggtga ggctgcctta tgggacccag
181gccctgaagc tgcacgcctg cgtttccggt gcttccgcta tgaggaggcc acagggcccc
241aagaggccct ggcccagctc cgagagctgt gtcgccagtg gctgcgtcca gaggtacgct
301ccaaggagca gatgctggag ctgttggtgc tggagcagtt cctgggcgca ctgccccctg
361agatccaggc ccgtgtgcag gggcagcggc caggcagccc cgaggaggct gctgccctag
421tagatgggct gcgccgggag ccgggcggac cccggagatg ggtcacagtc caggtgcagg
481gccaggaggt cctatcagag aagatggagc cctccagttt ccagccccta cctgaaactg
541agcctccaac tccagagcct gggcccaaga cacctcctag gactatgcag gaatcaccac
601tgggcctgca ggtgaaagag gagtcagagg ttacagagga ctcagatttc ctggagtctg
661ggcctctagc tgccacccag gagtctgtac ccaccctcct gcctgaggag gcccagagat
721gtgggaccgt gctggaccag atctttcccc acagcaagac tgggcctgag ggtccctcat
781ggagggagca ccccagggcc ctgtggcatg aggaagctgg gggcatcttc tccccagggt
841tcgcgctgca gctaggcagc atctccgcag gtccaggtag tgtaagccct cacctccacg
901tcccctggga cctcggcatg gctggccttt ctggccagat ccaatcaccc tcccgcgaag
961gtggctttgc gcatgcgctt ctgctcccca gcgatctgag gagtgaacag gaccccacgg
1021acgaggatcc ctgccggggt gtgggccctg ctctgatcac cacccgctgg cgctccccca
1081ggggccggag ccggggccgc cccagcactg ggggcggggt ggttaggggc ggccgttgcg
1141atgtatgtgg caaggtgttc agccaacgca gcaacctgct gaggcaccag aagatccaca
1201cgggtgagcg accattcgtg tgcagcgagt gcggccgcag cttcagccgc agctcgcacc
1261tgctgcgcca ccagcttacg cacaccgagg agcggccgtt cgtgtgcggc gactgtggcc
1321agggcttcgt gcgcagcgcg cgcctggaag agcatcggag agtgcacacg ggcgaacagc
1381ctttccgttg cgctgagtgc ggccagagct tccggcagcg ctccaatctg ctgcagcacc
1441agcgcatcca cggcgatccc ccgggccctg gcgctaagcc cccggcccct cctggtgcgc
1501ccgagcctcc cggccccttt ccgtgcagcg agtgccgcga gagcttcgcg cggcgcgccg
1561tgctgctgga gcaccaggcg gtacacacgg gcgacaagtc ctttggctgc gtcgagtgcg
1621gcgagcgctt cggccgccgc tcagtgctgc tgcagcaccg gcgcgtgcac agtggcgagc
1681ggcccttcgc ctgtgccgag tgcggccaga gcttccggca gcgctccaac ctgacgcagc
1741accggcgcat ccacaccggg gagcggccct tcgcctgcgc cgagtgtggc aaggccttcc
1801gccagcggcc tacgctcacg cagcatctcc gcgtacacac gggcgagaaa ccctttgcct
1861gccccgagtg tggccagcgc ttcagccagc gcctcaagct cacgcgtcat cagaggacac
1921acaccggcga aaagccctac cactgcggtg agtgcggcct gggcttcacg caggtctcgc
1981ggctcaccga gcaccagcgc atccacacgg gcgaacggcc cttcgcctgc cccgagtgcg
2041gccagagctt tcggcagcac gccaacctca cccagcaccg gcgcatccac acgggtgaac
2101ggccctacgc atgccctgag tgtggcaagg ccttccgcca gcggcccacg ctcacgcagc
2161atctgcgcac ccaccgacga gagaagccct tcgcctgcca ggactgtggc cgccgcttcc
2221accagagcac caagctcatt cagcaccagc gcgtccacag cgccgagtac ccaactttct
2281tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
2341aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

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