Construct: ORF ccsbBroad304_01954

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017150.1_s304c1, BRDN0000461283
Derived from:
ccsbBroadEn_01954
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDC14A (8556)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01954
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8556 CDC14A cell division cycle 14A NM_033313.2 100% 100%
2 human 8556 CDC14A cell division cycle 14A XM_017002647.1 77.4% 77.5% 1139delA;1142_1143insGTTTTCC;1144_1467del
3 human 8556 CDC14A cell division cycle 14A XM_017002646.1 74.7% 72.8% (many diffs)
4 human 8556 CDC14A cell division cycle 14A NM_003672.4 63.8% 63.8% 1139delA;1142_1143insGTTTTCC;1144_1782del
5 human 8556 CDC14A cell division cycle 14A NM_001319210.2 62.1% 62.1% 1139delA;1142_1143insGTTTTCC;1144_1830del
6 human 8556 CDC14A cell division cycle 14A XM_005271296.3 61.7% 60.2% (many diffs)
7 human 8556 CDC14A cell division cycle 14A NM_033312.2 60.8% 60.8% 1139delA;1142_1143insGTTTTCC;1144_1869del
8 human 8556 CDC14A cell division cycle 14A XM_011542340.2 60.1% 58.6% (many diffs)
9 human 8556 CDC14A cell division cycle 14A XM_005271294.3 58.9% 57.4% (many diffs)
10 human 8556 CDC14A cell division cycle 14A XM_011542341.3 55.7% 53.7% (many diffs)
11 human 8556 CDC14A cell division cycle 14A XM_024450503.1 52.6% 52.6% (many diffs)
12 human 8556 CDC14A cell division cycle 14A NM_001319211.1 51.5% 51.5% (many diffs)
13 human 8556 CDC14A cell division cycle 14A XM_011542345.3 40.3% 39.9% (many diffs)
14 human 8556 CDC14A cell division cycle 14A XR_002957887.1 35.2% (many diffs)
15 human 8556 CDC14A cell division cycle 14A XR_002957888.1 34.1% (many diffs)
16 human 8556 CDC14A cell division cycle 14A NM_001319212.1 14% 13.8% (many diffs)
17 human 8556 CDC14A cell division cycle 14A XM_024450504.1 14% 13.8% (many diffs)
18 human 8556 CDC14A cell division cycle 14A XM_024450505.1 14% 13.8% (many diffs)
19 human 8556 CDC14A cell division cycle 14A XM_024450506.1 14% 13.8% (many diffs)
20 mouse 229776 Cdc14a CDC14 cell division cycle 14A NM_001080818.2 57% 60% (many diffs)
21 mouse 229776 Cdc14a CDC14 cell division cycle 14A XM_006501419.1 54.4% 57.2% (many diffs)
22 mouse 229776 Cdc14a CDC14 cell division cycle 14A NM_001173553.1 49.7% 52% (many diffs)
23 mouse 229776 Cdc14a CDC14 cell division cycle 14A XM_006501420.2 45.5% 48.4% (many diffs)
24 mouse 229776 Cdc14a CDC14 cell division cycle 14A XM_011240108.2 45.5% 48.4% (many diffs)
25 mouse 229776 Cdc14a CDC14 cell division cycle 14A XM_011240109.2 45.5% 48.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1218
ORF length:
1149
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcagcggag tcaggggaac taatcggggc ttgtgagttc atgaaagatc
121ggttatattt tgctacttta aggaatagac caaaaagcac agtaaatacc cactatttct
181ccatcgatga ggagctggtc tatgaaaatt tctatgcaga ttttggaccg ctgaacttgg
241caatggtgta cagatattgc tgcaaactaa acaagaaact aaaatcatac agtttgtcaa
301gaaagaaaat agtgcactac acctgttttg accaacggaa aagagcaaat gcagcatttt
361tgataggtgc ctatgcagta atctatttaa agaagacacc agaagaagcc tacagagcac
421tcctgtctgg ctcaaacccc ccctatcttc cattcaggga tgcttccttt ggaaattgca
481cttacaatct caccattctc gactgtttgc agggaatcag aaagggatta caacatggat
541tttttgactt tgagacattt gatgtggatg aatatgaaca ttatgagcga gttgaaaatg
601gtgacttcaa ctggattgtt ccaggaaaat ttttagcatt tagtggacca catcctaaaa
661gcaaaattga gaatggttat cctcttcacg cccctgaagc ctactttcct tatttcaaaa
721agcataatgt gactgcagtt gtgaggctaa acaaaaagat ttatgaggca aagcgcttca
781cagacgctgg cttcgagcac tatgacctct tcttcataga tggcagcaca cccagtgaca
841acatcgtgcg aaggttcctg aacatctgtg agaacaccga aggggccatc gccgttcact
901gcaaagctgg tcttggaaga acagggacat tgatagcctg ttatgtaatg aaacactaca
961ggtttacaca tgctgaaata attgcttgga ttagaatatg ccggccaggc tctattatag
1021gaccccagca gcacttcctg gaagaaaaac aagcatcgtt gtgggtccaa ggagacattt
1081tccgatccaa actgaaaaat cgaccatcca gtgaaggaag tattaataaa attctttctg
1141gcctagatga tatgtctatt ggtggaaatc tttcaaaaac acaaaacatg gaacgatttg
1201gagaggtaag ttttcccttg ccaactttct tgtacaaagt ggttggtaag cctatcccta
1261accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1321agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)