Construct: ORF ccsbBroad304_01979

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004701.1_s304c1, BRDN0000406402
Derived from:
ccsbBroadEn_01979
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AKR1C3 (8644)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01979
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8644 AKR1C3 aldo-keto reductase family ... NM_003739.6 100% 100%
2 human 8644 AKR1C3 aldo-keto reductase family ... NM_001253908.1 99.2% 99.6% (many diffs)
3 human 1645 AKR1C1 aldo-keto reductase family ... NM_001353.6 91.6% 87.9% (many diffs)
4 human 1646 AKR1C2 aldo-keto reductase family ... NM_001354.5 91.2% 86.9% (many diffs)
5 human 1646 AKR1C2 aldo-keto reductase family ... NM_205845.2 91.2% 86.9% (many diffs)
6 human 1109 AKR1C4 aldo-keto reductase family ... NM_001818.4 88.5% 84.2% (many diffs)
7 human 1645 AKR1C1 aldo-keto reductase family ... XM_017015791.2 84.6% 82% (many diffs)
8 human 1646 AKR1C2 aldo-keto reductase family ... NM_001321027.1 84.2% 81.1% (many diffs)
9 human 8644 AKR1C3 aldo-keto reductase family ... NM_001253909.2 41.5% 39.3% (many diffs)
10 human 1646 AKR1C2 aldo-keto reductase family ... NM_001135241.2 37% 33.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1035
ORF length:
969
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ttccaaacac cagtgtgtaa agctaaatga tggccacttc atgcctgtat
121tgggatttgg cacctatgca cctccagagg ttccgagaag taaagctttg gaggtcacaa
181aattagcaat agaagctggg ttccgccata tagattctgc tcatttatac aataatgagg
241agcaggttgg actggccatc cgaagcaaga ttgcagatgg cagtgtgaag agagaagaca
301tattctacac ttcaaagctt tggtccactt ttcatcgacc agagttggtc cgaccagcct
361tggaaaactc actgaagaaa gctcaattgg actatgttga cctctatctt attcattctc
421caatgtctct aaagccaggt gaggaacttt caccaacaga tgaaaatgga aaagtaatat
481ttgacatagt ggatctctgt accacctggg aggccatgga gaagtgtaag gatgcaggat
541tggccaagtc cattggggtg tcaaacttca accgcaggca gctggagatg atcctcaaca
601agccaggact caagtacaag cctgtctgca accaggtaga atgtcatccg tatttcaacc
661ggagtaaatt gctagatttc tgcaagtcga aagatattgt tctggttgcc tatagtgctc
721tgggatctca acgagacaaa cgatgggtgg acccgaactc cccggtgctc ttggaggacc
781cagtcctttg tgccttggca aaaaagcaca agcgaacccc agccctgatt gccctgcgct
841accagctgca gcgtggggtt gtggtcctgg ccaagagcta caatgagcag cgcatcagac
901agaacgtgca ggtttttgag ttccagttga ctgcagagga catgaaagcc atagatggcc
961tagacagaaa tctccactat tttaacagtg atagttttgc tagccaccct aattatccat
1021attcagatga atattaccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1081ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1141cgacaatcaa cctctggatt a

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