Construct: ORF ccsbBroad304_02044

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004879.1_s304c1, BRDN0000398891
Derived from:
ccsbBroadEn_02044
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
EIF2S2 (8894)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02044
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8894 EIF2S2 eukaryotic translation init... NM_003908.5 100% 100%
2 human 8894 EIF2S2 eukaryotic translation init... NM_001316363.2 99% 99% 294_295insAAGGATCTT
3 human 8894 EIF2S2 eukaryotic translation init... XM_017028118.1 98.4% 98.4% 0_1insATGTCTGGGGACGAG
4 human 8894 EIF2S2 eukaryotic translation init... NM_001316364.2 94.2% 94.2% 683_684ins57
5 mouse 67204 Eif2s2 eukaryotic translation init... NM_026030.2 92.1% 95.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1065
ORF length:
999
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttgccatgtc tggggacgag atgatttttg atcctactat gagcaagaag aaaaagaaga
121agaagaagcc ttttatgtta gatgaggaag gggataccca aacagaggaa acccagcctt
181cagaaacaaa agaagtggag ccagagccaa ctgaggacaa ggatttggaa gctgatgaag
241aggacactag gaaaaaagat gcttctgatg atctagatga cttgaacttc tttaatcaaa
301agaaaaagaa gaaaaaaact aaaaagatat ttgatattga tgaagctgaa gaaggtgtaa
361aggatcttaa gattgaaagt gatgttcaag aaccaactga accagaggat gaccttgaca
421ttatgcttgg caataaaaag aagaaaaaga agaatgttaa gttcccagat gaggatgaaa
481tactagagaa agatgaagct ctagaagatg aagacaacaa aaaagatgat ggtatctcat
541tcagtaatca gacaggccct gcttgggcag gctcagaaag agactacaca tacgaggagc
601tgctgaatcg agtgttcaac atcatgaggg aaaagaatcc agatatggtt gctggggaga
661aaaggaaatt tgtcatgaaa cctccacaag tcgtccgagt aggaaccaag aaaacttctt
721ttgtcaactt tacagatatc tgtaaactat tacatcgtca gcccaaacat ctccttgcat
781ttttgttggc tgaattgggt acaagtggtt ctatagatgg taataaccaa cttgtaatca
841aaggaagatt ccaacagaaa cagatagaaa atgtcttgag aagatatatc aaggaatatg
901tcacttgtca cacatgccga tcaccggaca caatcctgca gaaggacaca cgactctatt
961tcctacagtg cgaaacttgt cattctagat gttctgttgc cagtatcaaa accggcttcc
1021aggctgtcac gggcaagcga gcacagctcc gtgccaaagc taactaccca actttcttgt
1081acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1141gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)

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