Construct: ORF ccsbBroad304_02533

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017651.1_s304c1, BRDN0000404312
Derived from:
ccsbBroadEn_02533
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NOXA1 (10811)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02533
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10811 NOXA1 NADPH oxidase activator 1 NM_006647.2 100% 100%
2 human 10811 NOXA1 NADPH oxidase activator 1 NM_001256067.2 98.5% 98.5% 1292_1293ins21
3 human 10811 NOXA1 NADPH oxidase activator 1 XM_011518158.3 92.5% 92.5% 502_503ins108
4 human 10811 NOXA1 NADPH oxidase activator 1 NM_001256068.1 88.4% 88.4% 501_502ins168
5 human 10811 NOXA1 NADPH oxidase activator 1 XM_011518159.1 69.3% 69.3% 0_1ins444
6 human 10811 NOXA1 NADPH oxidase activator 1 XM_011518160.1 69.3% 69.3% 0_1ins444
7 human 10811 NOXA1 NADPH oxidase activator 1 XM_017014220.1 69.3% 69.3% 0_1ins444
8 human 10811 NOXA1 NADPH oxidase activator 1 XM_024447388.1 67.9% 67.9% 0_1ins444;848_849ins21
9 human 10811 NOXA1 NADPH oxidase activator 1 XR_001746169.1 54.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1515
ORF length:
1449
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ctctctgggg gacctggtgc gcgcctggca cctgggcgcg caggctgtgg
121atcgtgggga ctgggcccgc gccttgcacc tcttctcggg cgtcccggcg ccgcccgcca
181ggctgtgctt caacgcgggc tgcgtgcacc tgctggccgg ggaccccgag gccgcgctgc
241gggcatttga ccaagccgtg accaaggaca cctgcatggc ggttggcttc ttccagcgag
301gagtggccaa cttccagctg gcaaggttcc aggaggctct gtctgacttc tggctggccc
361tggagcagct gaggggccac gctgccatcg actacacgca gctgggcctg cggttcaagc
421tgcaagcctg ggaggtgcta cacaatgtgg cgtcggcaca gtgccagctg gggctctgga
481cagaggcggc cagcagccta agggaggcca tgtccaagtg gccggagggg tccctgaatg
541gcctggactc agccctggac caagtgcaga gacggggctc actgccgcca cggcaggtcc
601ccaggggcga ggtcttccgg ccccaccggt ggcacctgaa gcacttggag cccgtggatt
661tcctgggcaa ggccaaggtg gtggcctctg ccatccccga cgaccagggc tggggcgtcc
721gccctcagca gccacaggga ccaggagcga accatgatgc caggtcccta atcatggact
781ccccaagagc tggcacccac cagggccccc tcgatgcaga gacagaggtc ggtgctgacc
841gctgcacgtc gactgcctac caggagcaga ggccccaggt ggagcaagtt ggcaaacagg
901ctcctctctc cccagggctg ccggcaatgg gggggcctgg ccccggcccc tgtgaggacc
961ccgcgggtgc tgggggagca ggtgcagggg gctccgagcc cctggtgact gtcaccgtgc
1021agtgcgcctt cacagtggcc ctgagggcac gaagaggagc cgacctgtcc agcctgcggg
1081cactgctggg ccaagccctc cctcaccagg cccagcttgg gcaactcagt tacctagccc
1141caggtgagga cgggcactgg gtccccatcc ccgaggagga gtcgctgcag agggcctggc
1201aggacgcagc tgcctgcccc agggggctgc agctgcagtg caggggagcc gggggtcggc
1261cggtcctcta ccaggtggtg gcccagcaca gctactccgc ccaggggcca gaggacctgg
1321gcttccgaca gggggacacg gtggacgtcc tgtgtgaaga gcccgatgtc ccccttgcag
1381tggaccaggc atggctggag ggccactgtg acggccgcat cggcatcttc cccaagtgct
1441tcgtggtccc cgccggccct cggatgtcag gagcccccgg ccgcctgccc cgatcccagc
1501agggagatca gccctaccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1561ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1621cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)