Construct: ORF ccsbBroad304_02608

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001784.1_s304c1, BRDN0000406516
Derived from:
ccsbBroadEn_02608
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WWP2 (11060)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02608
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11060 WWP2 WW domain containing E3 ubi... NM_001270455.2 100% 100%
2 human 11060 WWP2 WW domain containing E3 ubi... NM_001270454.2 38.4% 38.5% 1005_2610delinsG
3 human 11060 WWP2 WW domain containing E3 ubi... NM_007014.5 38.4% 38.5% 1005_2610delinsG
4 human 11060 WWP2 WW domain containing E3 ubi... XM_011522823.2 38.4% 38.5% 1005_2610delinsG
5 human 11060 WWP2 WW domain containing E3 ubi... XM_011522825.1 38.4% 38.5% 1005_2610delinsG
6 human 11060 WWP2 WW domain containing E3 ubi... XM_017022879.1 38.4% 38.5% 1005_2610delinsG
7 human 11060 WWP2 WW domain containing E3 ubi... XM_017022880.1 38.4% 38.5% 1005_2610delinsG
8 human 11060 WWP2 WW domain containing E3 ubi... XM_017022881.1 38.4% 38.5% 1005_2610delinsG
9 human 11060 WWP2 WW domain containing E3 ubi... NM_001270453.1 25.1% 25.1% 0_1ins348;657_2262delinsG
10 human 11060 WWP2 WW domain containing E3 ubi... XM_011522826.3 25.1% 25.1% 0_1ins348;657_2262delinsG
11 mouse 66894 Wwp2 WW domain containing E3 ubi... XM_017312941.1 87.5% 91.6% (many diffs)
12 mouse 66894 Wwp2 WW domain containing E3 ubi... XR_001778461.1 36.7% (many diffs)
13 mouse 66894 Wwp2 WW domain containing E3 ubi... NM_025830.3 33.7% 35.2% (many diffs)
14 mouse 66894 Wwp2 WW domain containing E3 ubi... XM_006531299.3 33.7% 35.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1071
ORF length:
1005
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc atctgccagc tctagccggg caggagtggc cctgcctttt gagaagtctc
121agctcacttt gaaagtggtg tccgcaaagc ccaaggtgca taatcgtcaa cctcgaatta
181actcctacgt ggaggtggcg gtggatggac tccccagtga gaccaagaag actgggaagc
241gcattgggag ctctgagctt ctctggaatg agatcatcat tttgaatgtc acggcacaga
301gtcatttaga tttaaaggtc tggagctgcc ataccttgag aaatgaactg ctaggcaccg
361catctgtcaa cctctccaac gtcttgaaga acaatggggg caaaatggag aacatgcagc
421tgaccctgaa cctgcagacg gagaacaaag gcagcgttgt ctcaggcgga gagctgacaa
481ttttcctgga cgggccaact gttgatctgg gaaatgtgcc taatggcagt gccctgacag
541atggatcaca gctgccttcg agagactcca gtggaacagc agtagctcca gagaaccggc
601accagccccc cagcacaaac tgctttggtg gaagatcccg gacgcacaga cattcgggtg
661cttcagccag aacaacccca gcaaccggcg agcaaagccc cggtgctcgg agccggcacc
721gccagcccgt caagaactca ggccacagtg gcttggccaa tggcacagtg aatgatgaac
781ccacaacagc cactgatccc gaagaacctt ccgttgttgg tgtgacgtcc ccacctgctg
841cacccttgag tgtgaccccg aatcccaaca cgacttctct ccctgcccca gccacaccgg
901ctgaaggaga ggaacccagc acttcgggta cacagcagct cccagcggct gcccaggccc
961ccgacgctct gcctgctgga tgggaacagc gagagctgcc caacggacgt gtctattatg
1021ttgaccacaa taccaagacc accacctggg agcggcccct tcctccaggg tacccaactt
1081tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1141agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)