Construct: ORF ccsbBroad304_03680

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001007.1_s304c1, BRDN0000409812
Derived from:
ccsbBroadEn_03680
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZC4H2 (55906)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03680
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55906 ZC4H2 zinc finger C4H2-type conta... NM_018684.4 100% 100%
2 human 55906 ZC4H2 zinc finger C4H2-type conta... NM_001178032.3 89.7% 89.7% 0_1ins69
3 human 55906 ZC4H2 zinc finger C4H2-type conta... NM_001243804.2 89.7% 89.7% 0_1ins69
4 human 55906 ZC4H2 zinc finger C4H2-type conta... NM_001178033.2 73.6% 57.5% 398_399ins163;510_528del
5 human 55906 ZC4H2 zinc finger C4H2-type conta... NR_045044.2 22.5% 1_73del;124_378del;1001_2979del
6 mouse 245522 Zc4h2 zinc finger, C4H2 domain co... NM_001003916.2 90.3% 100% (many diffs)
7 mouse 245522 Zc4h2 zinc finger, C4H2 domain co... XM_011247587.2 89.1% 98.6% (many diffs)
8 mouse 245522 Zc4h2 zinc finger, C4H2 domain co... NM_001289697.1 87.6% 96.8% (many diffs)
9 mouse 245522 Zc4h2 zinc finger, C4H2 domain co... NM_001289696.1 71% 60.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
738
ORF length:
672
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc agatgagcaa gaaatcatgt gcaaattgga aagcattaaa gagatcagga
121acaagaccct gcagatggag aagatcaagg ctcgtttgaa ggctgagttt gaggcacttg
181agtcagagga aaggcacctg aaggaataca agcaggagat ggaccttctg ctacaggaga
241agatggccca tgtggaggaa ctccgactga tccacgctga catcaatgtg atggaaaaca
301ctatcaaaca atctgagaat gacctaaaca agctgctaga gtctacaagg aggctgcatg
361atgagtataa gccactgaaa gaacatgtgg atgccctgcg catgactctg ggcctgcaga
421ggctccctga cttgtgtgaa gaagaggaga agctttcctt ggattacttt gagaagcaga
481aagcagaatg gcagacagaa cctcaggagc cccccatccc tgagtccctg gccgctgcag
541ccgctgccgc ccaacagctc caagtggcta ggaagcagga tactcggcag acggccacct
601tcaggcagca gcccccacct atgaaggcct gcttgtcatg tcaccagcaa attcaccgga
661atgcacctat atgccctctt tgcaaggcca agagtcggtc ccggaacccc aaaaagccga
721aacggaagca ggatgaatac ccaactttct tgtacaaagt ggttggtaag cctatcccta
781accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
841agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)