Construct: ORF ccsbBroad304_03700

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006824.1_s304c1, BRDN0000462148
Derived from:
ccsbBroadEn_03700
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PCDHGB2 (56103)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03700
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56103 PCDHGB2 protocadherin gamma subfami... NM_032096.1 100% 100%
2 human 56103 PCDHGB2 protocadherin gamma subfami... NM_018923.2 86.9% 86.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2502
ORF length:
2433
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gaaagcgagc tcagggaggt gcgggctggt gcggtggctg caggtactgt
121tgcccttcct gttgtctttg ttccccgggg ctctcccagt ccagatccgc tattcaattc
181cagaggagct ggccaaaaac tcggtcgtag gaaacctcgc caaggatctg gggctcagcg
241tccgggactt gccagcccgg aagctgcggg ttagcgcgga gaaggaatat ttcacagtaa
301acccagaaag cggagactta cttgtgagtg acagaataga ccgagaacag atatgcggga
361agcagcctct gtgtgttctg gatttcgata ctgtcgctga aaatccacta aatattttct
421acatagcagt aattgtgcag gatataaatg ataatacccc gctattcaaa cagactaaga
481ttaatttaaa aattggcgaa tccactaagc caggtacaac atttccactt gacccagccc
541tggattcaga tgttggtcct aactcactac aaagatacca ccttaatgac aacgagtact
601ttgatctcgc tgagaaacag actccagatg gtcgtaaata tcctgagttg attctaaaac
661actctctgga cagagaagag cacagtttac atcaattggt cctcacagct gtggatggcg
721gagacccacc tcaaagtggc acgacccaaa tccgaatcaa agtcacggat gccaacgata
781accctccagt gttcagccag gacgtgtaca gggtcaccct gagggaggac gtgccgccgg
841gcttctttgt gcttcaagtg acagccaccg accgggatga aggcataaac gcagagatca
901cctactcctt tcataatgtg gacgaacaag tgaaacactt tttcaactta aatgaaaaaa
961caggagaaat cacgacaaag gatgatttgg attttgagat tgcaagtagt tacactctga
1021gtatcgaagc aaaagatcct ggagatctag cagcccactg cagtatccaa gttgaaattc
1081ttgatgacaa cgattgtgca cctgaagtta ttgtgacttc agtatctact cccctaccgg
1141aggattcgcc accaggaaca gtgatcgcct tgataaaaac gagagacaga gactctggag
1201aaaatggaga agtttactgc caagtgttgg gaaatgccaa gtttattttg aaatcttcct
1261caaagaacta ttacaaacta gtgacagacg gcgctctgga ccgggaggag atcccagaat
1321acaatctcac catcacagcc accgacgggg gcaagccgcc cctctcctcc agcataattg
1381tcaccctgca catctccgac gtcaacgata atgccccagt tttccaacag acttcctaca
1441tggttcacgt ggcagagaac aatcctcctg gcgcctctat cgctcaaatc agtgcctctg
1501accctgactt gggccccagt ggccaagttt cctactccat cgtagcgagc gacctgaagc
1561cgcgggagat tttatcctac gtgtccgtga gcgcgcagag cggggtggtg ttcgcgcagc
1621gcgccttcga tcatgagcag ctgcgcgcct tcgagctcac actgcaggcc cgcgaccagg
1681gctcgcccgc gctcagcgcc aacgtgagcc tgcgcgtgtt agtgggcgac ctcaatgaca
1741atgcgccacg ggtgctgtac cccgcgctgg ggcctgatgg ctccgccctc ttcgatatgg
1801tgccacgcgc cgcagagccc ggctacctgg tgaccaaggt ggtggcggtg gacgcagact
1861caggacacaa cgcttggctg tcctaccacg tgctgcaggc cagcgagccc gggctcttca
1921gcctggggtt gcgcacgggt gaggtgcgca cagcgcgtgc cttgggcgac agggacgcgg
1981cccgccagcg cctgctggtc gctgtgcgtg atggaggaca gccgccactc tccgctacgg
2041ccacgctgca cctaatcttc gcggatagcc tgcaagaggt attgccagac ctcagcgacc
2101gccgggagcc ctctgacccc caggcaaaac tgcagtttta cctggttgtg gccttggcct
2161tgatctcagt gctcttcttc ctcgcggtga ttctggcaat ctccctgcgc ctgcgactct
2221cttccaggtc agatgcttgg gactgttttc agcctggtct cagctccaag cctggacctg
2281gggttctccc caattacagt gagggtacat tgccctattc ctacaacctg tgtgttgcct
2341cacaatcagc caagacagag ttcaattttc tgaacataac cccggaattg gttcccgcgc
2401aagatctcgt ctgtgacaat gcctcttggg aacaaaatac aaatcatgga gccgctgggg
2461tcccttttgc ctcagatact attttgaagg tgagctttaa tttgccaact ttcttgtaca
2521aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
2581ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

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