Construct: ORF ccsbBroad304_03765

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014853.1_s304c1, BRDN0000398770
Derived from:
ccsbBroadEn_03765
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DTWD1 (56986)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03765
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56986 DTWD1 DTW domain containing 1 NM_001144955.2 100% 100%
2 human 56986 DTWD1 DTW domain containing 1 NM_020234.6 100% 100%
3 human 56986 DTWD1 DTW domain containing 1 XM_017022419.1 100% 100%
4 human 56986 DTWD1 DTW domain containing 1 XM_017022420.1 100% 100%
5 human 56986 DTWD1 DTW domain containing 1 XM_017022421.1 100% 100%
6 human 56986 DTWD1 DTW domain containing 1 XM_017022422.1 100% 100%
7 human 56986 DTWD1 DTW domain containing 1 XM_017022423.2 79.1% 76.2% (many diffs)
8 human 56986 DTWD1 DTW domain containing 1 XM_017022424.1 79.1% 76.2% (many diffs)
9 human 56986 DTWD1 DTW domain containing 1 XM_011521815.2 74.1% 73% (many diffs)
10 human 56986 DTWD1 DTW domain containing 1 XM_017022425.1 74.1% 73% (many diffs)
11 human 56986 DTWD1 DTW domain containing 1 XM_017022426.1 74.1% 73% (many diffs)
12 human 56986 DTWD1 DTW domain containing 1 XM_017022427.1 71.2% 71% 0_1ins261;2T>A
13 human 56986 DTWD1 DTW domain containing 1 XM_017022428.1 71.2% 71% 0_1ins261;2T>A
14 human 56986 DTWD1 DTW domain containing 1 XM_017022429.1 71.2% 71% 0_1ins261;2T>A
15 human 56986 DTWD1 DTW domain containing 1 XM_017022430.2 71.2% 71% 0_1ins261;2T>A
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
978
ORF length:
912
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tctcaatcca cctatatttc tcaaacgaag tgaagaaaat agttcaaaat
121ttgtggaaac aaaacagtca caaactactt ccatagcttc agaagatccc cttcaaaact
181tatgtttagc atctcaagaa gttcttcaaa aagctcagca aagtgggaga tcaaaatgtc
241tcaaatgtgg tggttccaga atgttctact gctatacatg ttatgttcca gttgaaaatg
301tacctattga acagattcca cttgtgaagc ttccattgaa gattgacatc attaaacatc
361caaatgaaac agatggcaaa agtactgcta tacatgcaaa actcttagca cctgaatttg
421taaacattta cacgtatccg tgtattccag aatatgaaga aaaggaccat gaagttgcac
481tcatttttcc tggacctcag tctatctcaa taaaagatat ttcttttcat ctgcaaaaaa
541ggattcaaaa taatgttaga ggcaaaaatg atgaccctga caagccatct tttaaacgca
601aaagaactga agaacaagag ttctgtgatt tgaatgacag caagtgcaaa ggcacaacac
661tgaaaaaaat tatatttata gatagcacct ggaaccaaac aaacaaaata ttcactgatg
721agcgacttca agggttgtta caagttgagt tgaaaacaag aaaaacttgc ttttggcgcc
781atcaaaaagg aaagccagat actttccttt ctacaattga agccatttac tactttctgg
841tagactacca tactgatata ttaaaagaga aatacagagg gcaatatgac aatcttttat
901ttttctattc ttttatgtac cagttgataa agaatgccaa atgctctgga gataaggaaa
961caggaaaact tacacataac ccaactttct tgtacaaagt ggttggtaag cctatcccta
1021accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1081agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)