Construct: ORF ccsbBroad304_03878

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002043.1_s304c1, BRDN0000400806
Derived from:
ccsbBroadEn_03878
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SENP2 (59343)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03878
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 59343 SENP2 SUMO specific peptidase 2 NM_021627.3 100% 100%
2 human 59343 SENP2 SUMO specific peptidase 2 XM_005247690.3 92.5% 92.5% 1110_1111ins132
3 human 59343 SENP2 SUMO specific peptidase 2 XM_005247691.3 80.4% 80.4% 0_1ins345
4 human 59343 SENP2 SUMO specific peptidase 2 XM_017006973.2 73% 73% 0_1ins345;765_766ins132
5 mouse 75826 Senp2 SUMO/sentrin specific pepti... NM_029457.3 88.3% 87.9% (many diffs)
6 mouse 75826 Senp2 SUMO/sentrin specific pepti... XM_006522688.2 87.5% 87.2% (many diffs)
7 mouse 75826 Senp2 SUMO/sentrin specific pepti... XM_006522689.3 81% 80.3% (many diffs)
8 mouse 75826 Senp2 SUMO/sentrin specific pepti... XM_006522690.1 76.4% 76.2% (many diffs)
9 mouse 75826 Senp2 SUMO/sentrin specific pepti... NR_027488.1 34.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1833
ORF length:
1767
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgta cagatggctg gttaggattc tcggcaccat tttccgtttc tgcgaccggt
121cggtgccccc tgcccgggcc ctcctgaaga ggcggcgctc agacagcact ctgttttcta
181cagtggacac tgatgaaata ccagccaaaa gaccaagatt agattgcttt attcaccaag
241tgaaaaacag tctctacaat gctgccagct tatttggatt cccattccag ctgaccacaa
301agcccatggt aacttctgct tgtaatggaa cacggaatgt ggccccttca ggagaggtat
361tttcgaactc ttcatcttgt gaactgacag gttctggatc ctggaacaac atgctgaaac
421tgggtaataa atctcctaat ggaataagtg actatccaaa gatcagagtg acagttaccc
481gagatcagcc acgcagagtc ctgccttcct ttggttttac tttgaactca gaaggctgta
541atagaagacc aggtggccgt cgccatagca aaggtaatcc agagagttct ttaatgtgga
601aacctcagga acaggctgta acagagatga tttctgaaga gagtggcaag ggtctgaggc
661gtccccattg tactgtggag gagggtgttc aaaaagagga aagagagaag taccgaaagt
721tattggaacg acttaaagaa agtggtcatg gaaactctgt ctgtcctgta acttcaaatt
781atcacagttc tcaaagaagt cagatggaca cattaaagac caaaggctgg ggggaagagc
841aaaatcacgg agtcaaaaca actcagtttg ttccaaaaca atatagactt gttgaaacaa
901ggggacctct atgttcattg agaagtgaaa agaggtgttc aaaggggaaa attactgata
961cagagacgat ggtcggaatc agatttgaaa atgaaagtag gaggggatac caactggagc
1021ctgacctatc agaagaagtg tcggcccgac tccgcctggg cagtggaagc aatggcttac
1081tcaggaggaa agtgtcaata attgagacaa aggaaaagaa ttgctcaggc aaagagaggg
1141acagaagaac ggacgatctc cttgaactta cagaggacat ggaaaaggaa atcagtaatg
1201ccctaggcca tggcccacag gatgaaatcc taagtagtgc tttcaaattg cgaattactc
1261gaggagatat tcagacatta aagaactatc actggctcaa tgatgaagtc attaattttt
1321acatgaatct tctggtggaa agaaataaaa agcaaggcta tccagcactt catgtattca
1381gtactttctt ctatcctaaa ttaaagtctg ggggttacca agcagtgaaa cgatggacca
1441aaggggtaaa tctctttgaa caagaaatta ttctggtgcc tattcatcgg aaggtacatt
1501ggagcctggt ggtgattgac ctaagaaaaa agtgtcttaa atatctggat tctatgggac
1561aaaagggcca caggatctgt gagattctcc ttcagtattt acaggatgaa agtaagacca
1621aaagaaatag tgatctgaat cttttagagt ggacccatca cagcatgaaa ccacacgaga
1681ttcctcaaca gctgaatggg agtgattgtg gaatgtttac ttgtaaatat gcagattata
1741tttctaggga caaacctatc acatttactc agcaccagat gcctctcttc cggaagaaga
1801tggtgtggga aatccttcat cagcagttgc tgtgcccaac tttcttgtac aaagtggttg
1861gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1921accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)

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