Construct: ORF ccsbBroad304_04227

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011739.1_s304c1, BRDN0000411919
Derived from:
ccsbBroadEn_04227
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SETD7 (80854)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04227
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80854 SETD7 SET domain containing 7, hi... NM_030648.3 100% 100%
2 human 80854 SETD7 SET domain containing 7, hi... NM_001306199.1 88.1% 84% (many diffs)
3 human 80854 SETD7 SET domain containing 7, hi... XM_017008661.1 62.2% 62.2% 0_1ins414
4 human 80854 SETD7 SET domain containing 7, hi... NM_001306200.1 36.1% 34.1% (many diffs)
5 mouse 73251 Setd7 SET domain containing (lysi... NM_080793.5 87.9% 95.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1167
ORF length:
1098
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggatagcgac gacgagatgg tggaggaggc ggtggaaggg cacctggacg
121atgacggatt accgcacggg ttctgcacag tcacctactc ctccacagac agatttgagg
181ggaactttgt tcacggagaa aagaacggac gggggaagtt cttcttcttt gatggcagca
241ccctggaggg gtattatgtg gatgatgcct tgcagggcca gggagtttac acttacgaag
301atgggggagt tctccagggc acgtatgtag acggagagct gaacggtcca gcccaggaat
361atgacacaga tgggagactg atcttcaagg ggcagtataa agataacatt cgtcatggag
421tgtgctggat atattaccca gatggaggaa gccttgtagg agaagtaaat gaagatgggg
481agatgactgg agagaagata gcctatgtgt accctgatga gaggaccgca ctttatggga
541aatttattga tggagagatg atagaaggca aactggctac ccttatgtcc actgaagaag
601ggaggcctca ctttgaactg atgcctggaa attcagtgta ccactttgat aagtcgactt
661catcttgcat ttctaccaat gctcttcttc cagatcctta tgaatcagaa agggtttatg
721ttgctgaatc tcttatttcc agtgctggag aaggactttt ttcaaaggta gctgtgggac
781ctaatactgt tatgtctttt tataatggag ttcgaattac acaccaagag gttgacagca
841gggactgggc ccttaatggg aacaccctct cccttgatga agaaacggtc attgatgtgc
901ctgagcccta taaccacgta tccaagtact gtgcctcctt gggacacaag gcaaatcact
961ccttcactcc aaactgcatc tacgatatgt ttgtccaccc ccgttttggg cccatcaaat
1021gcatccgcac cctgagagca gtggaggccg atgaagagct caccgttgcc tatggctatg
1081accacagccc ccccgggaag agtgggcctg aagcccctga gtggtaccag gtggagctga
1141aggccttcca ggccacccag caaaagttgc caactttctt gtacaaagtg gttggtaagc
1201ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
1261ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)