Construct: ORF ccsbBroad304_04569

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008221.1_s304c1, BRDN0000401155
Derived from:
ccsbBroadEn_04569
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OXNAD1 (92106)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04569
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001352977.1 100% 100%
2 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001352978.2 100% 100%
3 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_138381.5 100% 100%
4 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_017007486.2 100% 100%
5 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_017007487.2 100% 100%
6 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_017007489.2 100% 100%
7 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_017007491.2 100% 100%
8 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_017007492.1 100% 100%
9 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001330670.2 94.5% 94.5% 1_54del
10 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001330671.3 94.5% 94.5% 1_54del
11 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001352980.1 84.5% 78.5% (many diffs)
12 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001352981.1 84.5% 78.5% (many diffs)
13 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001352982.2 84.5% 78.5% (many diffs)
14 human 92106 OXNAD1 oxidoreductase NAD binding ... NM_001352983.2 84.5% 78.5% (many diffs)
15 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_017007493.2 84.5% 78.5% (many diffs)
16 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_024453828.1 84.5% 78.5% (many diffs)
17 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_005265559.4 81% 81% 1_219del
18 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_011534230.3 81% 81% 1_219del
19 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_011534233.3 81% 81% 1_219del
20 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_011534234.3 81% 81% 1_219del
21 human 92106 OXNAD1 oxidoreductase NAD binding ... XM_011534235.3 81% 81% 1_219del
22 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_940512.3 30.3% 1_487del;1424_3089del
23 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_940511.3 30.1% 1_487del;1424_3109del
24 human 92106 OXNAD1 oxidoreductase NAD binding ... NR_148219.1 29.5% 1_586del;770_843del;1597_3165del
25 human 92106 OXNAD1 oxidoreductase NAD binding ... NR_148218.1 28.8% 1_586del;770_946del;1700_3248del
26 human 92106 OXNAD1 oxidoreductase NAD binding ... NR_148217.1 28.6% 1_586del;770_946del;1700_3268del
27 human 92106 OXNAD1 oxidoreductase NAD binding ... NR_148220.2 21.8% 1_452del;636_709del;1463_4279del
28 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_001740364.2 21% 1_487del;1424_4440del
29 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_001740365.2 13.4% 1_474del;1411_6944del
30 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_002959607.1 9.3% 1_468del;1405_10002del
31 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_002959608.1 9.3% 1_474del;1411_10008del
32 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_002959606.1 9.3% 1_487del;1424_10021del
33 human 92106 OXNAD1 oxidoreductase NAD binding ... XR_002959609.1 9.1% 1_474del;658_834del;1588_10185del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1002
ORF length:
936
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ctgtgctgct gttatgattc ctgggttgtt gcggtgctct gttggagcca
121tccgtattga ggctgcgtca ctgagattga cactcagcac tttgcgccac cttactctaa
181ccagcataat gaaatccaaa aggaaaactg atcacatgga gagaactgca agtgtccttc
241gacgggagat tgtgtcagca gctaaggtgt gtggagctgc cagtgagtca ccgtcagtga
301agagcctccg cttgcttgtt gctgatcaag acttttcctt taaagctggc cagtgggttg
361atttctttat tccaggagtc tctgtggttg gtgggttttc aatatgctcc agtcccagac
421tgctagaaca agagagagtg atagaattgg cagtgaaata tacgaaccac cctcctgccc
481tctgggttca caatacgtgt acacttgact gtgaagtggc tgtgagagtg ggtggagagt
541tcttctttga ccctcagcct gcggatgcct ctagaaacct cgtgttgatt gcaggaggag
601tcggaattaa ccctctgctt tccatcctgc ggcacgcagc agatctcctc agagagcagg
661caaacaaaag aaatggatat gagataggaa caataaaact attctacagt gcaaaaaata
721ccagcgaact cctgtttaag aaaaatatcc ttgatttagt aaatgaattt cctgagaaga
781ttgcatgcag tttgcatgtt acaaaacaga ctacacaaat caatgcggaa ctcaagccat
841acatcacgga aggaagaata acggagaagg agataagaga tcatatttca aaagagactt
901tgttctatat ttgtggccca cctccaatga cagacttttt ctccaagcaa ctggaaaaca
961accatgtacc caaagaacac atttgctttg agaagtggtg gtacccaact ttcttgtaca
1021aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1081ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

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