Construct: ORF ccsbBroad304_04625

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012290.1_s304c1, BRDN0000406947
Derived from:
ccsbBroadEn_04625
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MYL12B (103910)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04625
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 103910 MYL12B myosin light chain 12B NM_001144944.1 100% 100%
2 human 103910 MYL12B myosin light chain 12B NM_001144945.1 100% 100%
3 human 103910 MYL12B myosin light chain 12B NM_033546.3 100% 100%
4 human 10627 MYL12A myosin light chain 12A NM_001303047.1 95.1% 97.6% (many diffs)
5 human 10627 MYL12A myosin light chain 12A NM_001303048.1 95.1% 97.6% (many diffs)
6 human 10627 MYL12A myosin light chain 12A NM_006471.3 95.1% 97.6% (many diffs)
7 human 10627 MYL12A myosin light chain 12A NM_001303049.1 91.9% 94.3% (many diffs)
8 human 10398 MYL9 myosin light chain 9 NM_006097.5 81% 93% (many diffs)
9 human 10398 MYL9 myosin light chain 9 NM_181526.3 56.7% 64.5% (many diffs)
10 mouse 67938 Myl12b myosin, light chain 12B, re... NM_023402.2 88.7% 100% (many diffs)
11 mouse 67268 Myl12a myosin, light chain 12A, re... NM_026064.2 86.6% 97.6% (many diffs)
12 mouse 67268 Myl12a myosin, light chain 12A, re... XM_006524822.1 83.7% 94.3% (many diffs)
13 mouse 98932 Myl9 myosin, light polypeptide 9... NM_172118.1 81.3% 93.6% (many diffs)
14 mouse 98932 Myl9 myosin, light polypeptide 9... XM_006500453.3 81.3% 93.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
582
ORF length:
516
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc gagcaaaaag gcaaagacca agaccaccaa gaagcgccct cagcgtgcaa
121catccaatgt gtttgccatg tttgaccagt cacagattca ggagttcaaa gaggccttca
181acatgattga tcagaacaga gatggcttca tcgacaagga agatttgcat gatatgcttg
241cttctctagg gaagaatccc actgatgcat accttgatgc catgatgaat gaggccccag
301ggcccatcaa tttcaccatg ttcctgacca tgtttggtga gaagttaaat ggcacagatc
361ctgaagatgt catcagaaac gcctttgctt gctttgatga agaagcaaca ggcaccattc
421aggaagatta cctaagagag ctgctgacaa ccatggggga tcggtttaca gatgaggaag
481tggatgagct gtacagagaa gcacctattg acaaaaaggg gaatttcaat tacatcgagt
541tcacacgcat cctgaaacat ggagccaaag acaaagatga ctgcccaact ttcttgtaca
601aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
661ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)

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