Construct: ORF ccsbBroad304_05110

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008113.1_s304c1, BRDN0000460742
Derived from:
ccsbBroadEn_05110
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CFAP161 (161502)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05110
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 161502 CFAP161 cilia and flagella associat... NM_173528.4 100% 100%
2 human 161502 CFAP161 cilia and flagella associat... XM_006720408.2 91.6% 91.6% 0_1ins75
3 human 161502 CFAP161 cilia and flagella associat... XM_017021963.1 91.6% 91.6% 0_1ins75
4 human 161502 CFAP161 cilia and flagella associat... NM_001353365.2 71.8% 70.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
972
ORF length:
903
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgcagaac gtgtatggtc cgggagtccg gataggcaac tggaatgagg
121atgtctacct ggaggaggag ctcatgaaag acttcttaga gaagagagac aaggggaaac
181ttctcataca gagaagtaga agactaaaac agaatctctt gagaccgatg caactttccg
241taactgaaga tggctatatt cattacggtg acaaagtgat gcttgtgaat cctgatgatc
301ctgacacaga agctgatgtg tttctgcgtg gggacctgag cctgtgtatg actccagatg
361aaattcagtc ccatctgaaa gacgaattag aggtaccctg tggcctgagc gcagttcaag
421ccaagacccc aattggcaga aacactttta tcattttgag tgtacacaga gatgccactg
481gtcaagtcct tagatatggg caggactttt gcctggggat aacaggagga tttgacaaca
541aaatgttgta tttgtcaagt gaccacagga ccctcctgaa atcgtctaag aggtcttggc
601tccaggaagt gtacctaaca gatgaggtct cccatgtgaa ctgctggcag gctgccttcc
661ctgaccccca gttacgcctg gaatatgaag gcttccccgt cccggcaaat gctaaaattc
721tcatcaatca ctgtcacaca aatcggggac tggcagccca ccggcatctt ttcttaagca
781cctattttgg aaaggaggct gaggttgtag ctcacacata cctggattca catagagttg
841agaaaccaag gaaccactgg atgttggtta ctgggaatcc cagggatgcc tcgtcctcca
901tgttggatct gcccaaacca cccacagagg acactcgagc catggagcag gccatgggcc
961ttgacacgca gttgccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
1021tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
1081caatcaacct ctggatta

Download FASTA (ORF) (Full)