Construct: ORF ccsbBroad304_05402

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001864.1_s304c1, BRDN0000398796
Derived from:
ccsbBroadEn_05402
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KIAA0825 (285600)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05402
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 285600 KIAA0825 KIAA0825 NM_173665.3 100% 100%
2 human 285600 KIAA0825 KIAA0825 XM_017009376.2 100% 100%
3 human 285600 KIAA0825 KIAA0825 XM_017009377.1 100% 100%
4 human 285600 KIAA0825 KIAA0825 XM_017009374.1 25.8% 25.8% 971T>G;973_3753del
5 human 285600 KIAA0825 KIAA0825 XM_011543333.2 25.8% 25.7% 971T>G;973_3756del
6 human 285600 KIAA0825 KIAA0825 XM_011543334.2 25.8% 25.7% 971T>G;973_3756del
7 human 285600 KIAA0825 KIAA0825 XM_017009373.1 25.8% 25.7% 971T>G;973_3756del
8 human 285600 KIAA0825 KIAA0825 XM_011543332.1 25.6% 25.5% 971T>G;973_3789del
9 human 285600 KIAA0825 KIAA0825 NM_001145678.2 25.3% 25.3% 971T>G;973_3825del
10 human 285600 KIAA0825 KIAA0825 XM_006714588.2 25.2% 25.2% 971T>G;973_3840del
11 human 285600 KIAA0825 KIAA0825 XM_011543331.1 25.2% 25.2% 971T>G;973_3840del
12 human 285600 KIAA0825 KIAA0825 XM_011543330.2 25.2% 25.1% 971T>G;973_3849del
13 human 285600 KIAA0825 KIAA0825 XM_011543324.2 24.1% 24% 971T>G;973_4023del
14 human 285600 KIAA0825 KIAA0825 XM_011543325.3 24.1% 24% 971T>G;973_4023del
15 human 285600 KIAA0825 KIAA0825 XM_011543327.2 24.1% 24% 971T>G;973_4023del
16 human 285600 KIAA0825 KIAA0825 XM_011543328.3 24.1% 24% 971T>G;973_4023del
17 human 285600 KIAA0825 KIAA0825 XM_011543329.2 24.1% 24% 971T>G;973_4023del
18 human 285600 KIAA0825 KIAA0825 XM_011543335.2 15.7% 15.7% 0_1ins336;635T>G;637_3687del
19 human 285600 KIAA0825 KIAA0825 XR_001742053.2 15.4% 1_257del;1228T>G;1230_6282del
20 human 285600 KIAA0825 KIAA0825 XR_948246.2 8.9% 1_257del;1228T>G;1230_10891del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1038
ORF length:
972
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ttgggatgat gaatattctc ataattcttt tgacctacat tgtttgttaa
121actcatttcc tggagacttg gagtttgagc agatcttcag tgacattgat gaaaagattg
181aacaaaatgc tgcaagcata aaacattgca ttaaagagat acagtccgaa attaacaaac
241aatgtccagg tgtgcagctg caaacaacaa ctgactgctt tgaatggcta actaactata
301attacagtac atctgaatca tctttcattt ctcatggaga cttgataaaa tttttcaaaa
361cactgcaaga tttgttgaag aatgaacaaa atcaagaaga aatgacattg gatttacttt
421gggacctctc ctgccacagc agcgtttcat tcccatcaac cctaagtgga acatctttcc
481atttcctctc taggacgtct cttcattctg ttgaagataa ttcctctatg gatgtcaagt
541ctatgtggga tgatataaga ctgcatcttc gacgcttctt agtgagcaaa ttacaaagcc
601ataatgaaat aaacaattca cagcaaaaaa ttttattgaa aaagcagtgc ttacaacaac
661tcttgtttct ttatccagaa tcagaagtta taatcaaata ccaaaacata cagaataaac
721tgttggctaa tcttctgtgg aactgctttc cttcttacaa cagagattca aatttagatg
781taatagctca tggatatcaa agtacaatgc ttaagttata ctcagtaata aaagaggatt
841ttaacacact atgtgaaatt ttagctccat cttcaatggt gaaattcatt aaagaaactt
901acctggatac tgttacagaa gaaatggcaa aatttcttga aaatttttgt gagctgcagt
961tcagagaaaa tgctgttcgt gtggttaaaa caagcaagag ctccagcaag catagaggag
1021cagtgcatgc tttgggttac ccaactttct tgtacaaagt ggttggtaag cctatcccta
1081accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1141agtcgacaat caacctctgg atta

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