Construct: ORF ccsbBroad304_05632

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018034.1_s304c1, BRDN0000461409
Derived from:
ccsbBroadEn_05632
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KNOP1 (400506)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05632
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 400506 KNOP1 lysine rich nucleolar prote... NM_001012991.3 100% 100%
2 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348528.2 100% 100%
3 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348529.2 100% 100%
4 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348530.2 100% 100%
5 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348531.2 100% 100%
6 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348532.2 94.9% 94.9% 916_917ins69
7 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348533.2 94.9% 94.9% 916_917ins69
8 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348534.2 94.9% 94.9% 916_917ins69
9 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348535.2 94.9% 94.9% 916_917ins69
10 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348536.2 94.9% 94.9% 916_917ins69
11 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348537.2 94.9% 94.9% 916_917ins69
12 human 400506 KNOP1 lysine rich nucleolar prote... NM_001348527.2 88.4% 88.4% 1_180del
13 human 400506 KNOP1 lysine rich nucleolar prote... XM_024450278.1 83.9% 83.9% 1_180del;1096_1097ins69
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1443
ORF length:
1374
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gatcaccaag acacacaaag tagaccttgg gctcccagag aagaaaaaga
121agaagaaagt ggtcaaagaa ccagagactc gatactcagt tttaaacaat gatgattact
181ttgctgatgt ttctccttta agagctacat ccccctctaa gagtgtggcc catgggcagg
241cacctgagat gcctctagtg aagaaaaaga agaagaaaaa gaagggtgtc agcacccttt
301gcgaggagca tgtagaacct gagaccacgc tgcctgctag acggacagag aagtcaccca
361gcctcaggaa gcaggtgttt ggccacttgg agttcctcag tggggaaaag aaaaataaga
421agtcacctct agccatgtcc catgcctctg gggtgaaaac ctccccagac cctagacagg
481gtgaggagga aaccagagtt ggcaagaagc tcaaaaaaca caagaaggaa aaaaaggggg
541cccaggaccc cacagccttc tcggtccagg acccttggtt ctgtgaggcc agggaggcca
601gggatgttgg ggacacttgc tcagtgggga agaaggatga ggaacaggca gccttggggc
661agaaacggaa gcggaagagc cccagagaac acaatgggaa ggtgaagaag aaaaaaaaaa
721tccaccagga gggagatgcc ctcccaggcc actccaagcc ctccaggtcc atggagagca
781gccctaggaa aggaagtaaa aagaagccag tcaaagttga ggctccggaa tacatcccca
841taagtgatga ccctaaggcc tccgcaaaga aaaagatgaa gtccaaaaag aaggtagagc
901agccagtcat cgaggagcca gctctgaaaa ggaagaaaaa gaagaagagg aaagagagtg
961gggtagcagg agacccttgg aaggaggaaa cagacacgga cttagaggtg gtgttggaaa
1021aaaaaggcaa catggatgag gcgcacatag accaggtgag gcgaaaggcc ttgcaagaag
1081agatcgatcg cgagtcaggc aaaacggaag cttctgaaac caggaagtgg acgggaaccc
1141agtttggcca gtgggatact gctggttttg agaacgagga ccaaaaactg aaatttctca
1201gacttatggg tggcttcaaa aacctgtccc cttcgttcag ccgccccgcc agcacgattg
1261caaggcccaa catggccctc ggcaagaagg cggctgacag cctgcagcag aatctgcagc
1321gggactacga ccgggccatg agctggaagt acagccgggg agccggcctc ggcttctcca
1381ccgcccccaa caagatcttt tacattgaca ggaacgcttc caagtcagtc aagctggaag
1441atttgccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1501tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1561tctggatta

Download FASTA (ORF) (Full)