Construct: ORF ccsbBroad304_05851

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003339.1_s304c1, BRDN0000461624
Derived from:
ccsbBroadEn_05851
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
STS (412)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05851
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 412 STS steroid sulfatase NM_000351.7 99% 99.1% 0_1insATGCCTTTAAGGAAG;1272G>A
2 human 412 STS steroid sulfatase NM_001320752.2 99% 99.1% 0_1insATGCCTTTAAGGAAG;1272G>A
3 human 412 STS steroid sulfatase NM_001320753.1 99% 99.1% 0_1insATGCCTTTAAGGAAG;1272G>A
4 human 412 STS steroid sulfatase NM_001320754.1 99% 99.1% 0_1insATGCCTTTAAGGAAG;1272G>A
5 human 412 STS steroid sulfatase NM_001320750.2 98.5% 98.1% (many diffs)
6 human 412 STS steroid sulfatase NM_001320751.1 98.5% 98.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1818
ORF length:
1749
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcctttaagg aagatgaaga tccctttcct cctactgttc tttctgtggg
121aagccgagag ccacgcagca tcaaggccga acatcatcct ggtgatggct gacgacctcg
181gcattggaga tcctgggtgc tatgggaaca aaactatcag gactcccaat atcgaccggt
241tggccagtgg gggagtgaaa ctcactcagc acctggcagc atcaccgctg tgcacaccaa
301gcagggcagc cttcatgact ggccggtacc ctgtccgatc aggaatggca tcttggtccc
361gcactggagt tttcctcttc acagcctctt cgggaggact tcccaccgat gagattacct
421ttgctaagct tctgaaggat caaggttatt caacagcact gatagggaaa tggcaccttg
481ggatgagctg tcacagcaag actgacttct gtcaccaccc tttacatcac ggcttcaatt
541atttctatgg gatctctttg accaatctga gagactgcaa gcccggagag ggcagtgtct
601tcaccacggg cttcaagagg ctggtcttcc tccccctgca gatcgtcggg gtcaccctcc
661ttacccttgc tgcactcaat tgtctggggc tactccacgt gcctctaggc gtttttttca
721gccttctctt cctagcagcc ctaatcctga cccttttctt gggcttcctt cattacttcc
781ggcccctgaa ctgcttcatg atgaggaact acgagatcat tcagcagccc atgtcctatg
841acaatctcac ccagaggcta acggtggagg cggcccagtt catacagcgg aacactgaga
901ctccgttcct gcttgtcttg tcctacctcc acgtgcacac agccctgttc tccagcaaag
961actttgctgg caaaagtcaa cacggagtct acggggatgc tgttgaggaa atggactgga
1021gtgtggggca gatcttgaac cttctggatg agctgagatt ggctaatgat accctcatct
1081acttcacatc ggaccaggga gcacatgtag aagaagtgtc ttccaaagga gaaattcatg
1141gcggaagtaa tgggatctat aaaggaggaa aagcaaacaa ctgggaagga ggtatccggg
1201ttccaggcat ccttcgttgg cccagggtga tacaggctgg ccagaagatt gatgagccca
1261ctagcaacat ggacatattt cctacagtag ccaagctggc tggagctccc ttgcctgagg
1321acaggatcat tgatggacgt gatctgatgc ccctacttga aggaaaaagc caacgctccg
1381atcatgagtt tctcttccat tactgcaacg cctacttaaa tgctgtgcgc tggcaccctc
1441agaacagcac atccatctgg aaggcctttt tcttcacccc caacttcaac cccgtgggtt
1501ccaacggatg ctttgccaca cacgtgtgct tctgtttcgg gagttatgtc acccatcacg
1561acccaccttt actctttgat atttccaaag atcccagaga gagaaaccca ctaactccag
1621catccgagcc ccggttttat gaaatcctca aagtcatgca ggaagctgcg gacagacaca
1681cccagaccct gccagaggtg cccgatcagt tttcatggaa caactttctt tggaagccct
1741ggcttcagct gtgctgtcct tccaccggcc tgtcttgcca gtgtgataga gaaaaacagg
1801ataagagact gagccgcttg ccaactttct tgtacaaagt ggttggtaag cctatcccta
1861accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1921agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)