Construct: ORF ccsbBroad304_06008

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016278.1_s304c1, BRDN0000403165
Derived from:
ccsbBroadEn_06008
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AP2M1 (1173)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06008
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1173 AP2M1 adaptor related protein com... NM_001025205.1 99.7% 99.7% 13T>G;954C>T;1179G>A
2 human 1173 AP2M1 adaptor related protein com... NM_004068.4 99.3% 99.3% (many diffs)
3 human 1173 AP2M1 adaptor related protein com... NM_001311198.1 93.9% 93.9% (many diffs)
4 mouse 11773 Ap2m1 adaptor-related protein com... NM_001302970.1 92.5% 99.7% (many diffs)
5 mouse 11773 Ap2m1 adaptor-related protein com... NM_009679.3 92.1% 99.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1365
ORF length:
1299
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat tggaggcgta ttcatctata atcacaaggg ggaggtgctc atctcccgag
121tctaccgaga tgacatcggg aggaacgcag tggatgcctt tcgggtcaat gttatccatg
181cccggcagca ggtgcgcagc cccgtcacca acattgctcg caccagcttc ttccacgtta
241agcggtccaa catttggctg gcagcagtca ccaagcagaa tgtcaacgct gccatggtct
301tcgaattcct ctataagatg tgtgacgtga tggctgccta ctttggcaag atcagcgagg
361aaaacatcaa gaacaatttt gtgctcatat atgagctgct ggatgagatt ctagactttg
421gctacccaca gaattccgag acaggcgcgc tgaaaacctt catcacgcag cagggcatca
481agagtcagac aaaagaagag cagtcacaga tcaccagcca ggtaactggg cagattggct
541ggcggcgaga gggtatcaag tatcgtcgga atgagctctt cctggatgtg ctggagagtg
601tgaacctgct catgtcccca caagggcagg tgctgagtgc ccatgtgtcg ggccgggtgg
661tgatgaagag ctacctgagt ggcatgcctg aatgcaagtt tgggatgaat gacaagattg
721ttattgaaaa gcagggcaaa ggcacagctg atgaaacaag caagagcggg aagcaatcaa
781ttgccattga tgactgcacc ttccaccagt gtgtgcgact cagcaagttt gactctgaac
841gcagcatcag ctttatcccg ccagatggag agtttgagct tatgaggtat cgcacaacca
901aggacatcat ccttcccttc cgggtgatcc cgctagtgcg agaagtggga cgcaccaaac
961tggaggtcaa ggtggtcatc aagtccaact ttaaaccctc actgctggct cagaagattg
1021aggtgaggat cccaacccca ctgaacacaa gcggggtgca ggtgatctgc atgaagggga
1081aggccaagta caaggccagc gagaatgcca tcgtgtggaa gatcaagcgc atggcaggca
1141tgaaggaatc gcagatcagc gcagagattg agcttctgcc taccaacgac aagaagaaat
1201gggctcgacc ccccatttcc atgaactttg aggtgccatt cgcaccctct ggcctcaagg
1261tgcgctactt gaaggtgttt gaaccgaagc tgaactacag cgaccatgat gtcatcaaat
1321gggtgcgcta cattggccgc agtggcattt atgaaactcg ctgctaccca actttcttgt
1381acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1441gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)