Construct: ORF ccsbBroad304_06236

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016517.1_s304c1, BRDN0000402467
Derived from:
ccsbBroadEn_06236
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
XRCC6 (2547)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06236
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2547 XRCC6 X-ray repair cross compleme... NM_001288976.2 99.8% 100% 9G>C;1779G>T
2 human 2547 XRCC6 X-ray repair cross compleme... NM_001469.5 99.8% 100% 9G>C;1779G>T
3 human 2547 XRCC6 X-ray repair cross compleme... NM_001288977.2 93.1% 93.2% 9G>C;192_193ins123;1656G>T
4 human 2547 XRCC6 X-ray repair cross compleme... NM_001288978.1 91.7% 89.6% 0_1ins37;44_45ins113;1629G>T
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1893
ORF length:
1827
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc aggctgggag tcatattaca aaaccgaggg cgatgaagaa gcagaggaag
121aacaagaaga gaaccttgaa gcaagtggag actataaata ttcaggaaga gatagtttga
181tttttttggt tgatgcctcc aaggctatgt ttgaatctca gagtgaagat gagttgacac
241cttttgacat gagcatccag tgtatccaaa gtgtgtacat cagtaagatc ataagcagtg
301atcgagatct cttggctgtg gtgttctatg gtaccgagaa agacaaaaat tcagtgaatt
361ttaaaaatat ttacgtctta caggagctgg ataatccagg tgcaaaacga attctagagc
421ttgaccagtt taaggggcag cagggacaaa aacgtttcca agacatgatg ggccacggat
481ctgactactc actcagtgaa gtgctgtggg tctgtgccaa cctctttagt gatgtccaat
541tcaagatgag tcataagagg atcatgctgt tcaccaatga agacaacccc catggcaatg
601acagtgccaa agccagccgg gccaggacca aagccggtga tctccgagat acaggcatct
661tccttgactt gatgcacctg aagaaacctg ggggctttga catatccttg ttctacagag
721atatcatcag catagcagag gatgaggacc tcagggttca ctttgaggaa tccagcaagc
781tagaagacct gttgcggaag gttcgcgcca aggagaccag gaagcgagca ctcagcaggt
841taaagctgaa gctcaacaaa gatatagtga tctctgtggg catttataat ctggtccaga
901aggctctcaa gcctcctcca ataaagctct atcgggaaac aaatgaacca gtgaaaacca
961agacccggac ctttaataca agtacaggcg gtttgcttct gcctagcgat accaagaggt
1021ctcagatcta tgggagtcgt cagattatac tggagaaaga ggaaacagaa gagctaaaac
1081ggtttgatga tccaggtttg atgctcatgg gtttcaagcc gttggtactg ctgaagaaac
1141accattacct gaggccctcc ctgttcgtgt acccagagga gtcgctggtg attgggagct
1201caaccctgtt cagtgctctg ctcatcaagt gtctggagaa ggaggttgca gcattgtgca
1261gatacacacc ccgcaggaac atccctcctt attttgtggc tttggtgcca caggaagaag
1321agttggatga ccagaaaatt caggtgactc ctccaggctt ccagctggtc tttttaccct
1381ttgctgatga taaaaggaag atgcccttta ctgaaaaaat catggcaact ccagagcagg
1441tgggcaagat gaaggctatc gttgagaagc ttcgcttcac atacagaagt gacagctttg
1501agaaccccgt gctgcagcag cacttcagga acctggaggc cttggccttg gatttgatgg
1561agccggaaca agcagtggac ctgacattgc ccaaggttga agcaatgaat aaaagactgg
1621gctccttggt ggatgagttt aaggagcttg tttacccacc agattacaat cctgaaggga
1681aagttaccaa gagaaaacac gataatgaag gttctggaag caaaaggccc aaggtggagt
1741attcagaaga ggagctgaag acccacatca gcaagggtac gctgggcaag ttcactgtgc
1801ccatgctgaa agaggcctgc cgggcttacg ggctgaagag tggtctgaag aagcaggagc
1861tgctggaagc cctcaccaag cacttccagg actgcccaac tttcttgtac aaagtggttg
1921gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1981accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)

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