Construct: ORF ccsbBroad304_06414

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001359.1_s304c1, BRDN0000407107
Derived from:
ccsbBroadEn_06414
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
HSPD1 (3329)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06414
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3329 HSPD1 heat shock protein family D... NM_002156.5 99.8% 100% 27C>G;69T>C;273A>G
2 human 3329 HSPD1 heat shock protein family D... NM_199440.1 99.8% 100% 27C>G;69T>C;273A>G
3 mouse 15510 Hspd1 heat shock protein 1 (chape... NM_010477.4 90.6% 97.5% (many diffs)
4 mouse 15510 Hspd1 heat shock protein 1 (chape... XM_006495706.2 90.6% 97.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1785
ORF length:
1719
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct tcggttaccc acagtctttc ggcagatgag accggtgtcc agggtactgg
121ctcctcatct cacccgggct tatgccaaag atgtaaaatt tggtgcagat gcccgagcct
181taatgcttca aggtgtagac cttttagccg atgctgtggc cgttacaatg gggccaaagg
241gaagaacagt gattattgag cagagttggg gaagtcccaa agtaacaaaa gatggtgtga
301ctgttgcaaa gtcaattgac ttaaaagata aatacaagaa cattggagct aaacttgttc
361aagatgttgc caataacaca aatgaagaag ctggggatgg cactaccact gctactgtac
421tggcacgctc tatagccaag gaaggcttcg agaagattag caaaggtgct aatccagtgg
481aaatcaggag aggtgtgatg ttagctgttg atgctgtaat tgctgaactt aaaaagcagt
541ctaaacctgt gaccacccct gaagaaattg cacaggttgc tacgatttct gcaaacggag
601acaaagaaat tggcaatatc atctctgatg caatgaaaaa agttggaaga aagggtgtca
661tcacagtaaa ggatggaaaa acactgaatg atgaattaga aattattgaa ggcatgaagt
721ttgatcgagg ctatatttct ccatacttta ttaatacatc aaaaggtcag aaatgtgaat
781tccaggatgc ctatgttctg ttgagtgaaa agaaaatttc tagtatccag tccattgtac
841ctgctcttga aattgccaat gctcaccgta agcctttggt cataatcgct gaagatgttg
901atggagaagc tctaagtaca ctcgtcttga ataggctaaa ggttggtctt caggttgtgg
961cagtcaaggc tccagggttt ggtgacaata gaaagaacca gcttaaagat atggctattg
1021ctactggtgg tgcagtgttt ggagaagagg gattgaccct gaatcttgaa gacgttcagc
1081ctcatgactt aggaaaagtt ggagaggtca ttgtgaccaa agacgatgcc atgctcttaa
1141aaggaaaagg tgacaaggct caaattgaaa aacgtattca agaaatcatt gagcagttag
1201atgtcacaac tagtgaatat gaaaaggaaa aactgaatga acggcttgca aaactttcag
1261atggagtggc tgtgctgaag gttggtggga caagtgatgt tgaagtgaat gaaaagaaag
1321acagagttac agatgccctt aatgctacaa gagctgctgt tgaagaaggc attgttttgg
1381gagggggttg tgccctcctt cgatgcattc cagccttgga ctcattgact ccagctaatg
1441aagatcaaaa aattggtata gaaattatta aaagaacact caaaattcca gcaatgacca
1501ttgctaagaa tgcaggtgtt gaaggatctt tgatagttga gaaaattatg caaagttcct
1561cagaagttgg ttatgatgct atggctggag attttgtgaa tatggtggaa aaaggaatca
1621ttgacccaac aaaggttgtg agaactgctt tattggatgc tgctggtgtg gcctctctgt
1681taactacagc agaagttgta gtcacagaaa ttcctaaaga agagaaggac cctggaatgg
1741gtgcaatggg tggaatggga ggtggtatgg gaggtggcat gttctaccca actttcttgt
1801acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1861gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)

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