Construct: ORF ccsbBroad304_06675

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001559.1_s304c1, BRDN0000402979
Derived from:
ccsbBroadEn_06675
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC22A18 (5002)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06675
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5002 SLC22A18 solute carrier family 22 me... NM_002555.6 99.8% 99.7% 35G>A;234A>G
2 human 5002 SLC22A18 solute carrier family 22 me... NM_183233.3 99.8% 99.7% 35G>A;234A>G
3 human 5002 SLC22A18 solute carrier family 22 me... NM_001315501.1 83.1% 83.1% 1_255del;290G>A;489A>G
4 human 5002 SLC22A18 solute carrier family 22 me... NM_001315502.2 76.7% 76.6% 35G>A;234A>G;241_242ins294
5 human 5002 SLC22A18 solute carrier family 22 me... XM_011520141.2 57.5% 56.5% (many diffs)
6 human 5002 SLC22A18 solute carrier family 22 me... XM_011520142.2 57.3% 56.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1338
ORF length:
1272
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgca gggagctcgg gctcccaggg accagggcca gtcccccggc aggatgagcg
121ctctaggccg gtcctcggtc atcttgctta cctacgtgct ggccgccaca gaacttacct
181gcctcttcat gcagttctcc atcgtgccat acctgtctcg gaaactgggc ctggattcca
241ttgccttcgg ctacctgcaa accaccttcg gggtgctgca gctgctgggc gggccggtgt
301ttggcaggtt cgcagaccag cgcggggcgc gggcggcgct cacgctctcc ttcctggctg
361ccttggcgct ctacctgctc ctggcggccg cctccagccc ggccctgccc ggggtctacc
421tgctcttcgc ctcgcgcctg cccggagcgc tcatgcacac gctgccagcc gcccagatgg
481tcatcacgga cctgtcggca cccgaggagc ggcccgcggc cctgggccgg ctgggcctct
541gcttcggcgt cggagtcatc ctcggctccc tgctgggcgg gaccctggtc tccgcgtacg
601ggattcagtg cccggccatc ctggctgccc tggccaccct cctgggagct gtcctcagct
661tcacctgcat ccccgccagc accaaagggg ccaaaactga cgcccaggct ccactgccag
721gcggcccccg ggccagtgtg ttcgacctga aggccatcgc ctccctgctg cggctgccag
781acgtcccgag gatcttcctg gtgaaggtgg cctccaactg ccccacaggg ctcttcatgg
841tcatgttctc catcatctcc atggacttct tccagctgga ggccgcccaa gctggctacc
901tcatgtcctt cttcgggctc ctccagatgg tgacccaggg cctggtcatc gggcagctga
961gcagccactt ctcggaggag gtgctgctcc gggccagcgt gctggtcttc atcgtggtgg
1021gcctggccat ggcctggatg tccagcgtct tccacttctg cctcctggtg cccggcctgg
1081tgttcagcct ctgcaccctc aacgtggtca ccgacagcat gctgatcaag gctgtctcca
1141cctcggacac agggaccatg ctgggcctct gcgcctctgt acaaccactg ctccgaactc
1201tgggacccac ggtcggcggc ctcctgtacc gcagctttgg cgtccccgtc ttcggccacg
1261tgcaggttgc tatcaatacc cttgtcctcc tggtcctctg gaggaaacct atgccccaga
1321ggaaggacaa agtccggtgc ccaactttct tgtacaaagt ggttggtaag cctatcccta
1381accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1441agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)