Construct: ORF ccsbBroad304_06800

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002204.1_s304c1, BRDN0000399438
Derived from:
ccsbBroadEn_06800
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PSMB7 (5695)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06800
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5695 PSMB7 proteasome 20S subunit beta 7 NM_002799.4 99.8% 99.6% 116T>C
2 mouse 19177 Psmb7 proteasome (prosome, macrop... NM_011187.1 90.1% 96.3% (many diffs)
3 mouse 19177 Psmb7 proteasome (prosome, macrop... XM_006497785.2 65.3% 68.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
897
ORF length:
831
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggctgtgtcg gtgtatgctc caccagttgg aggcttctct tttgataact
121gccgcaggaa tgccgtcttg gaagccgatt ttgcaaagag gggatacaag cttccaaagg
181cccggaaaac tggcacgacc atcgctgggg tggtctataa ggatggcata gttcttggag
241cagatacaag agcaactgaa gggatggttg ttgctgacaa gaactgttca aaaatacact
301tcatatctcc taatatttat tgttgtggtg ctgggacagc tgcagacaca gacatgacaa
361cccagctcat ttcttccaac ctggagctcc actccctctc cactggccgt cttcccagag
421ttgtgacagc caatcggatg ctgaagcaga tgcttttcag gtatcaaggt tacattggtg
481cagccctagt tttaggggga gtagatgtta ctggacctca cctctacagc atctatcctc
541atggatcaac tgataagttg ccttatgtca ccatgggttc tggctccttg gcagcaatgg
601ctgtatttga agataagttt aggccagaca tggaggagga ggaagccaag aatctggtga
661gcgaagccat cgcagctggc atcttcaacg acctgggctc cggaagcaac attgacctct
721gcgtcatcag caagaacaag ctggattttc tccgcccata cacagtgccc aacaagaagg
781ggaccaggct tggccggtac aggtgtgaga aagggactac tgcagtcctc actgagaaaa
841tcactcctct ggagattgag gtgctggaag aaacagtcca aacaatggac acttcctgcc
901caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
961ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
1021tta

Download FASTA (ORF) (Full)