Construct: ORF ccsbBroad304_07513
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF010938.1_s304c1, BRDN0000399636
- Derived from:
- ccsbBroadEn_07513
- DNA Barcode:
- None
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- P2RY14 (9934)
Vector Information:
- Vector Backbone:
- pLX_304
- Pol II Cassette 1:
- PGK-BlastR
- Pol II Cassette 2:
- CMV-ccsbBroad304_07513
- Selection Marker:
- BlastR
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | NM_001081455.2 | 99.9% | 99.7% | 160A>G |
| 2 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | NM_014879.4 | 99.9% | 99.7% | 160A>G |
| 3 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_005247922.3 | 99.9% | 99.7% | 160A>G |
| 4 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_005247923.3 | 99.9% | 99.7% | 160A>G |
| 5 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_011513340.3 | 99.9% | 99.7% | 160A>G |
| 6 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_017007583.2 | 99.9% | 99.7% | 160A>G |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1080
- ORF length:
- 1014
- Sequence:
-
1 ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag 61 ttggcatgat caattcaacc tccacacagc ctccagatga atcctgctct cagaacctcc 121 tgatcactca gcagatcatt cctgtgctgt actgtatggt cttcattgca ggaatcctac 181 tcaatggagt gtcaggatgg atattctttt acgtgcccag ctctgagagt ttcatcatct 241 atctcaagaa cattgttatt gctgactttg tgatgagcct gacttttcct ttcaagatcc 301 ttggtgactc aggccttggt ccctggcagc tgaacgtgtt tgtgtgcagg gtctctgccg 361 tgctcttcta cgtcaacatg tacgtcagca ttgtgttctt tgggctcatc agctttgaca 421 gatattataa aattgtaaag cctctttgga cttctttcat ccagtcagtg agttacagca 481 aacttctgtc agtgatagta tggatgctca tgctcctcct tgctgttcca aatattattc 541 tcaccaacca gagtgttagg gaggttacac aaataaaatg tatagaactg aaaagtgaac 601 tgggacggaa gtggcacaaa gcatcaaact acatcttcgt ggccatcttc tggattgtgt 661 ttcttttgtt aatcgttttc tatactgcta tcacaaagaa aatctttaag tcccacctta 721 agtcaagtcg gaattccact tcggtcaaaa agaaatctag ccgcaacata ttcagcatcg 781 tgtttgtgtt ttttgtctgt tttgtacctt accatattgc cagaatcccc tacacaaaga 841 gtcagaccga agctcattac agctgccagt caaaagaaat cttgcggtat atgaaagaat 901 tcactctgct actatctgct gcaaatgtat gcttggaccc tattatttat ttctttctat 961 gccagccgtt tagggaaatc ttatgtaaga aattgcacat tccattaaaa gctcagaatg 1021 acctagacat ttccagaatc aaaagaggaa atacaacact tgaaagcaca gatactttgt 1081 gcccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg 1141 attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct 1201 ggatta