Construct: ORF ccsbBroad304_07604

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014430.1_s304c1, BRDN0000409952
Derived from:
ccsbBroadEn_07604
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CFDP1 (10428)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07604
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10428 CFDP1 craniofacial development pr... NM_006324.3 99.7% 99.6% 834T>C;885C>A
2 human 10428 CFDP1 craniofacial development pr... XM_011522814.2 74.2% 72.9% (many diffs)
3 human 10428 CFDP1 craniofacial development pr... XM_011522815.2 73.2% 72.5% (many diffs)
4 human 10428 CFDP1 craniofacial development pr... XR_001751819.2 64.2% (many diffs)
5 human 10428 CFDP1 craniofacial development pr... XR_933183.2 62.6% (many diffs)
6 human 10428 CFDP1 craniofacial development pr... XR_933182.3 61.8% (many diffs)
7 human 10428 CFDP1 craniofacial development pr... XR_001751818.2 58.9% (many diffs)
8 mouse 23837 Cfdp1 craniofacial development pr... NM_011801.1 84% 82.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
963
ORF length:
897
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ggaattcgac tccgaagact tctctacgtc ggaggaggac gaggactacg
121tgccgtcggg tggagagtat agtgaagatg atgtaaatga attagtgaag gaagatgaag
181tggatggtga agagcagaca cagaaaaccc aagggaaaaa aagaaaggcc cagagcattc
241cagccaggaa gagaagacaa ggtggcctct cattagaaga agaggaagag gaggatgcca
301attcagaatc tgagggaagc agtagtgagg aggaagatga cgctgcagag caggaaaaag
361gcattggatc agaggatgcc aggaaaaaga aggaggacga actctgggcc agcttcctca
421atgatgtggg accaaaatca aaagtgcccc caagtacaca agttaagaaa ggagaggaga
481ctgaagagac aagttcaagt aaattgttgg taaaagcaga agagctagag aaacctaaag
541aaacagaaaa agttaaaatc accaaggtgt ttgattttgc tggtgaagaa gtaagggtaa
601ctaaggaagt ggatgctaca tctaaagagg ccaaatcctt cttcaagcag aatgagaaag
661aaaaaccaca ggctaatgtt ccttcagctc tgccatcact ccctgccggg tcagggttaa
721aaagatcaag tggcatgagc agccttttgg ggaaaattgg tgccaagaag cagaaaatga
781gcacccttga gaagtccaaa ctggactggg agagcttcaa ggaggaagag gggattggtg
841aagaactggc catccataat cgagggaaag aggggtacat tgaacggaaa gccttcctcg
901accgagtgga tcacaggcag tttgaaattg agcgagatct caggctgaga aaaatgaaac
961cttgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1021tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1081tctggatta

Download FASTA (ORF) (Full)