Construct: ORF ccsbBroad304_08317

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010423.1_s304c1, BRDN0000402808
Derived from:
ccsbBroadEn_08317
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RAB6B (51560)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08317
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51560 RAB6B RAB6B, member RAS oncogene ... NM_016577.4 99.8% 100% 567C>T
2 human 51560 RAB6B RAB6B, member RAS oncogene ... NM_001363953.1 92.3% 89.9% (many diffs)
3 human 5870 RAB6A RAB6A, member RAS oncogene ... NM_198896.2 78.8% 90.8% (many diffs)
4 human 5870 RAB6A RAB6A, member RAS oncogene ... NM_001243718.2 40.6% 44.7% (many diffs)
5 mouse 270192 Rab6b RAB6B, member RAS oncogene ... NM_173781.4 92.4% 100% (many diffs)
6 mouse 270192 Rab6b RAB6B, member RAS oncogene ... XM_006511737.2 85.1% 88.2% (many diffs)
7 mouse 270192 Rab6b RAB6B, member RAS oncogene ... XM_006511736.3 76.8% 74.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
690
ORF length:
624
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc cgcaggggga gattttggga atccactgag aaaattcaag ttggtgttct
121tgggggagca gagcgtcggg aagacgtctc tgattacgag gttcatgtac gacagcttcg
181acaacacata ccaggcaacc attgggattg acttcttgtc aaaaaccatg tacttggagg
241accgcacggt gcgactgcag ctctgggaca cagctggtca ggagaggttc cgcagcctga
301tccccagcta catccgggac tccacggtgg ctgtggtggt gtacgacatc acaaatctca
361actccttcca acagacctct aagtggatcg acgacgtcag gacagagagg ggcagtgatg
421ttatcatcat gctggtgggc aacaagacgg acctggctga taagaggcag ataaccatcg
481aggaggggga gcagcgcgcc aaagaactga gcgtcatgtt cattgagacc agtgcgaaga
541ctggctacaa cgtgaagcag ctttttcgac gtgtggcgtc ggctctaccc ggaatggaga
601atgtccagga gaaaagcaaa gaagggatga ttgacatcaa gctggacaaa ccccaggagc
661ccccggccag cgagggcggc tgctcctgct acccaacttt cttgtacaaa gtggttggta
721agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
781ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)