Construct: ORF ccsbBroad304_08415

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000070.1_s304c1, BRDN0000462386
Derived from:
ccsbBroadEn_08415
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDHR2 (54825)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08415
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54825 CDHR2 cadherin related family mem... NM_001171976.1 99.8% 99.8% (many diffs)
2 human 54825 CDHR2 cadherin related family mem... NM_017675.5 99.8% 99.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3999
ORF length:
3930
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcccagcta tggctgtcct gcttcctcct tcctgccctc gtggtgtctg
121tggcagccaa cgtggccccg aagttcctag ccaacatgac gtcagtgatc ctgcctgagg
181acctgcctgt gggtgcccag gccttctggt tggtagcgga agaccaggac aatgaccctc
241tgacctatgg gatgagcggc cccaatgcct acttcttcgc tgtcactccg aaaactgggg
301aagtgaagct ggccagcgct ctggactacg agacactcta cacattcaaa gtcaccatct
361ccgtgagcga cccctacatc caggtgcaga gggagatgct ggtgattgtg gaagatagaa
421acgacaacgc acccgttttc cagaacaccg ctttctccac cagcatcaac gagaccctgc
481ccgtgggcag tgtggtgttc tccgtgctgg ccgtggataa agacatgggg tctgcaggca
541tggtcgtgta ctccatagag aaggtcatcc ctagcactgg ggacagcgag catctcttcc
601ggatcctggc caatggctcc atcgtcctca atggcagcct cagctacaac aacaagagcg
661ctttctacca gctggagctg aaggcctgtg acttgggcgg catgtaccac aacaccttca
721ccatccagtg ctccctgcct gtcttcctgt ccatctccgt ggtggaccag cctgaccttg
781acccccagtt tgtcagggag ttttactcgg cctctgtggc tgaggatgca gccaagggaa
841cctcggtgct gacggtggag gctgtggatg gcgacaaagg catcaatgac cctgtgatct
901acagcatctc ctactccacg cggcccggct ggtttgacat cggggcagat ggggtgatca
961gggtcaacgg ctccctggac cgtgagcagc tgctggaggc ggatgaggag gtgcagctgc
1021aggtcacggc caccgagaca cacctcaaca tctacgggca ggaggccaag gtgagcatct
1081gggtgacagt gagagtgatg gacgtcaatg accacaaacc tgagttttac aactgcagcc
1141tcccagcctg caccttcacc cccgaagagg cccaagtgaa cttcactggc tacgtggacg
1201agcatgcctc cccccgcatc cccatcgatg acctcaccat ggtggtctac gacccggaca
1261agggcagcaa tggcaccttc ctgttgtcgc tggggggccc cgatgcagaa gccttcagcg
1321tctccccgga gcgggcagcg ggctcagcct ccgttcaggt gctggtgaga gtatccgcgc
1381tggtggacta cgagaggcag acggcgatgg cggtgcaggt tgtggccaca gactccgtca
1441gccagaactt ctccgtcgcc atggtgacca tccaccttag agacattaat gaccacaggc
1501ccacgtttcc ccagagcttg tacgtcctca cggtgccaga gcacagcgcc accggctctg
1561tggtcaccga cagcatccac gccacggacc cagacacggg cgcgtggggc caaattacct
1621acagcctgct cccaggaaat ggggcagacc tcttccaagt ggatcccgtc tcagggacgg
1681tgacggtgag gaacggtgag ctgctggacc gggagagcca ggccgtgtac tacctgacgc
1741tgcaggccac agatggcggg aacctgtcct cctccaccac actgcagatc cacctgctgg
1801acatcaacga caatgcaccc gtggttagcg gctcctacaa catcttcgtc caggaggagg
1861agggcaatgt ctccgtgacc atccaggccc acgacaatga tgagccgggc accaacaaca
1921gccgtctgct cttcaacctg ctgcctggcc cctacagcca caacttctcc ttggaccctg
1981acacagggct cctcagaaac ctggggcccc tggacagaga ggccatcgac cccgccctgg
2041agggccgcat tgtgctgaca gtgcttgtgt ctgactgcgg cgagcctgtc ctcggcacca
2101aagtcaatgt caccatcact gtggaggaca tcaatgataa cctgcccatc ttcaatcagt
2161ccagctacaa ctttacggtg aaggaggagg atccaggagt gctagtgggc gtggtgaagg
2221cctgggacgc ggaccagacg gaagccaaca accgcatcag cttcagcctg tcggggagtg
2281gtgccaacta cttcatgatc cgaggcttgg tgctgggggc tgggtgggct gagggctacc
2341tccggctgcc cccggacgtg agcctggatt acgagacaca gcccgtcttc aacttgacag
2401tgagtgctga gaacccagac ccccaggggg gtgagaccat agtagacgtc tgcgtgaatg
2461tgaaagacgt gaacgacaat ccccccaccc tggatgtagc ctcactccgg ggcatccgtg
2521tggctgagaa tggctcacag cacggccagg tggctgtggt ggttgcctcg gatgtggaca
2581ccagtgccca gctggagata cagcttgtga acattctctg caccaaggcc ggggtcgatg
2641tgggcagcct atgctggggc tggttctcag tggcggccaa cggctctgtg tacatcaacc
2701agagcaaagc catcgactac gaggcctgtg acctggtcac gctggttgtg cgggcctgtg
2761acctagccac ggaccccggc ttccaggcct acagcaacaa tggaagcctc ctcattacca
2821ttgaggacgt gaatgacaat gcaccctatt ttctgcctga gaataagact tttgtgatca
2881tccctgaact cgtgctgccc aaccgggagg tggcttctgt ccgggccaga gacgatgatt
2941cagggaacaa tggcgtcatc ctgttctcca tcctccgagt agacttcatc tctaaggacg
3001gggccaccat ccctttccag ggtgtcttct cgatcttcac ctcctccgag gccgacgtgt
3061tcgctgggag cattcagccg gtgaccagcc tcgactccac tctccaaggc acctaccaag
3121tgacagtcca ggccagggac agaccttcct tgggtccttt cctggaagcc accaccaccc
3181tgaatctctt caccgtggac cagagttacc gctcgcggct gcagttctcc acaccgaagg
3241aggaggtggg cgccaacaga caggcgatta atgcggctct tacccaggca accaggacta
3301cagtatacat tgtggacatt caggacatag attctgcagc tcgggcccga cctcactcct
3361acctcgatgc ctactttgtc ttccccaatg ggtcagccct gacccttgat gagctgagtg
3421tgatgatccg gaatgatcag gactcgctga tgcagctgct gcagctgggg ctggtggtgc
3481tgggctccca ggagagccag gagtcagacc tgtcgaaaca gctcatcagt gtcatcatag
3541gattgggagt ggctttgctg ctggtccttg tgatcatgac catggccttc gtgtgtgtgc
3601ggaagagcta caaccggaag cttcaagcta tgaaggctgc caaggaggcc aggaagacag
3661cagcaggggt gatgccctca gcccctgcca tcccagggac taacatgtac aacactgagc
3721gagccaaccc catgctgaac ctccccaaca aagacctggg cttggagtac ctctctccct
3781ccaatgacct ggactctgtc agcgtcaact ccctggacga caactctgtg gatgtggaca
3841agaacagtca ggaaatcaag gagcacaggc caccacacac accaccagag ccagatccag
3901agcccctgag cgtggtcctg ttaggacggc aggcaggcgc aagtggacag ctggaggggc
3961catcctacac caacgctggc ctggacacca cggacctgtt gccaactttc ttgtacaaag
4021tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
4081gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

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