Construct: ORF ccsbBroad304_08514

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008657.1_s304c1, BRDN0000408582
Derived from:
ccsbBroadEn_08514
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC29A3 (55315)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08514
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55315 SLC29A3 solute carrier family 29 me... NM_018344.6 99.6% 99.3% (many diffs)
2 human 55315 SLC29A3 solute carrier family 29 me... NM_001363518.1 83.2% 82.9% (many diffs)
3 human 55315 SLC29A3 solute carrier family 29 me... XM_017016377.2 68.9% 68.6% (many diffs)
4 human 55315 SLC29A3 solute carrier family 29 me... NR_033413.1 58.7% (many diffs)
5 human 55315 SLC29A3 solute carrier family 29 me... XM_017016378.2 56.3% 56.2% (many diffs)
6 human 55315 SLC29A3 solute carrier family 29 me... NM_001174098.1 54.1% 53.8% 473C>T;714_715delTGinsCA;774_775ins651
7 human 55315 SLC29A3 solute carrier family 29 me... NR_033414.1 48.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1494
ORF length:
1425
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggccgttgtc tcagaggacg actttcagca cagttcaaac tccacctaca
121gaaccacaag cagcagtctc cgagctgacc aggaggcact gcttgagaag ctgctggacc
181gcccgccccc tggcctgcag aggcccgagg accgcttctg tggcacatac atcatcttct
241tcagcctggg cattggcagt ctactgccat ggaacttctt tatcactgcc aaggagtact
301ggatgttcaa actccgcaac tcctccagcc cagccaccgg ggaggaccct gagggctcag
361acatcctgaa ctactttgag agctaccttg ccgttgcctc caccgtgccc tccatgctgt
421gcctggtggc caacttcctg cttgtcaaca gggttgcagt ccacatccgt gtcctggcct
481cactgacggt catcctggcc atcttcatgg tgataactgc actggtgaag gtggacactt
541tctcctggac ccgtggcttt tttgcggtca ccattgtctg catggtgatc ctcagcggtg
601cctccactgt cttcagcagc agcatctacg gcatgaccgg ctcctttcct atgaggaact
661cccaggcact gatatcagga ggagccatgg gcgggacggt cagcgccgtg gcctcattgg
721tggacttggc tgcatccagt gatgtgagga acagcgccct ggccttcttc ctgacggcca
781ccatcttcct cgtgctctgc atgggactct acctgctgct gtccaggctg gagtatgcca
841ggtactacat gaggcctgtt cttgcggccc atgtgttttc tggtgaagag gagcttcccc
901aggactccct cagtgcccct tcggtggcct ccagattcat tgattcccac acaccccctc
961tccgccccat cctgaagaag acggccagcc tgggcttctg tgtcacctac gtcttcttca
1021tcaccagcct catctacccc gccgtctgca ccaacatcga gtccctcaac aagggctcgg
1081gctcactgtg gaccaccaag tttttcatcc ccctcactac cttcctcctg tacaactttg
1141ctgacctatg tggccggcag ctcaccgcct ggatccaggt gccagggccc aatagcaagg
1201cgctcccagg gttcgtgctc ctccggacct gcctcatccc cctcttcgtg ctctgtaact
1261accagccccg cgtccacctg aagactgtgg tcttccagtc cgatgtgtac cccgcactcc
1321tcagctccct gctggggctc agcaacggct acctcagcac cctggccctc ctctacgggc
1381ctaagattgt gcccagggag ctggctgagg ccacgggagt ggtgatgtcc ttttatgtgt
1441gcttgggctt aacactgggc tcagcctgct ctaccctcct ggtgcacctc atcttgccaa
1501ctttcttgta caaagtggtt ggtaagccta tccctaaccc tctcctcggt ctcgattcta
1561cgtagtaatg agctagcgct aaccggtggc gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)