Construct: ORF ccsbBroad304_08803

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008497.1_s304c1, BRDN0000399934
Derived from:
ccsbBroadEn_08803
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MIIP (60672)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08803
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 60672 MIIP migration and invasion inhi... NM_021933.4 99.7% 99.2% 297A>T;424C>T;499A>G
2 human 60672 MIIP migration and invasion inhi... XM_011541895.1 99.7% 99.2% 297A>T;424C>T;499A>G
3 human 60672 MIIP migration and invasion inhi... XM_011541896.1 99.7% 99.2% 297A>T;424C>T;499A>G
4 human 60672 MIIP migration and invasion inhi... XM_005263487.4 93.5% 92.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1230
ORF length:
1164
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggt ggaggctgag gaactggcac agctgcggct gctcaatctg gagctcctga
121ggcagctgtg ggtggggcag gatgctgtgc ggcggtcagt ggccagggca gcctcggagt
181caagcctgga atccagcagc agctacaact cagagactcc atcgacccca gagacgtcct
241caacttcctt gagcacctcc tgcccacggg gccggtcctc cgtgtggggc ccaccagatg
301cctgtcgagg ggacctccgt gatgtggcca gatcgggggt ggcctctctc ccacctgcca
361attgccagca ccaggagtcc ctgggccgac cgagacccca ctcagcaccc tcgctgggca
421cctcaagcct gagggaccca gagccctcag ggaggctggg tgatccagga ccccaggagg
481cacagacctc gaggtccatc ctggctcaac agagcaagct gtccaagccc agggtgacct
541tctctgagga gtctgcagtt cctgagagga gctggcgcct caggccatac ctgggctatg
601actggattgc agggtctctg gacaccagct cttccatcac cagccagcct gaggccttct
661tctccaagct gcaggagttt cgggaaacca acaaggagga gtgtatctgc agccatcctg
721aaccccagtt gccaggcctg cgtgagagca gtggcagcgg cgtggaggaa gaccatgaat
781gcgtgtactg ttaccgtgtc aaccggcgcc tgttcccggt gcctgtggat cccggtaccc
841cctgccgcct gtgcaggaca ccgcgagacc agcagggccc tgggaccctg gcgcagccag
901cgcacgtcag ggtgagcatc ccgctgtcga tcctggagcc cccgcaccgg taccacatcc
961accggcgaaa gagctttgac gcctctgaca cactggccct gccccggcac tgcctgctgg
1021gctgggacat ttttcctccg aagtctgaga aaagctcagc ccccaggaac ctggacctct
1081ggtcctctgt ctccgctgag gcccagcacc agaagctgtc cggcaccagc agcccttttc
1141acccggcctc accaatgcag atgctgcccc cgaccccgac ctggtcagtg ccccaggtcc
1201ctcggcccca cgtcccacgg cagaagccct gcccaacttt cttgtacaaa gtggttggta
1261agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
1321ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)