Construct: ORF ccsbBroad304_09045

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015140.1_s304c1, BRDN0000409280
Derived from:
ccsbBroadEn_09045
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ITIH5 (80760)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09045
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80760 ITIH5 inter-alpha-trypsin inhibit... NM_032817.6 99.8% 99.8% 135C>T;798C>T;2165G>A
2 human 80760 ITIH5 inter-alpha-trypsin inhibit... NM_030569.7 76.9% 76.7% (many diffs)
3 human 80760 ITIH5 inter-alpha-trypsin inhibit... XM_011519713.3 74.9% 74.7% (many diffs)
4 human 80760 ITIH5 inter-alpha-trypsin inhibit... NM_001001851.2 50.9% 49% (many diffs)
5 human 80760 ITIH5 inter-alpha-trypsin inhibit... XM_011519714.3 49.6% 47.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2250
ORF length:
2184
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcg gaactatgat tctgggcctc ccccatctac tgtcattaac caaaatgaaa
121catttgccaa cataattttt aaacctactg tagtacaaca agccaggatt gcccagaatg
181gaattttggg agactttatt attagatatg acgtcaatag agaacagagc attggggaca
241tccaggttct aaatggctat tttgtgcact actttgctcc taaagacctt cctcctttac
301ccaagaatgt ggtattcgtg cttgacagca gtgcttctat ggtgggaacc aaactccggc
361agaccaagga tgccctcttc acaattctcc atgacctccg accccaggac cgtttcagta
421tcattggatt ttccaaccgg atcaaagtat ggaaggacca cttgatatca gtcactccag
481acagcatcag ggatgggaaa gtgtacattc accatatgtc acccactgga ggcacagaca
541tcaacggggc cctgcagagg gccatcaggc tcctcaacaa gtacgtggcc cacagtggca
601ttggagaccg gagcgtgtcc ctcatcgtct tcctgacgga tgggaagccc acggtcgggg
661agacgcacac cctcaagatc ctcaacaaca cccgagaggc cgcccgaggc caagtctgca
721tcttcaccat tggcatcggc aacgacgtgg acttcaggct gctggagaaa ctgtcgctgg
781agaactgtgg cctcacacgg cgcgtgcacg aggaggagga cgcaggctcg cagctcatcg
841ggttctacga tgaaatcagg actccgctcc tctctgacat ccgcatcgat tatcccccca
901gctcagtggt gcaggccacc aagaccctgt tccccaacta cttcaacggc tcggagatca
961tcattgcggg gaagctggtg gacaggaagc tggatcacct gcacgtggag gtcaccgcca
1021gcaacagtaa gaaattcatc atcctgaaga cagatgtgcc tgtgcggcct cagaaggcag
1081ggaaagatgt cacaggaagc cccaggcctg gaggcgatgg agagggggac accaaccaca
1141tcgagcgtct ctggagctac ctcaccacaa aggagctgct gagctcctgg ctgcaaagtg
1201acgatgaacc ggagaaggag cggctgcggc agcgggccca ggccctggct gtgagctacc
1261gcttcctcac tcccttcacc tccatgaagc tgagggggcc ggtcccacgc atggatggcc
1321tggaggaggc ccacggcatg tcggctgcca tgggacccga accggtggtg cagagcgtgc
1381gaggagctgg cacgcagcca ggacctttgc tcaagaagcc ataccagcca agaattaaaa
1441tctctaaaac atcagtggat ggtgatcccc actttgttgt ggatttcccc ctgagcagac
1501tcaccgtgtg cttcaacatt gatgggcagc ccggggacat cctcaggctg gtctctgatc
1561acagggactc tggtgtcaca gtgaacggag agttaattgg ggcacccgcc cctccaaatg
1621gccacaagaa acagcgcact tacttgcgca ctatcaccat cctcatcaac aagccagaga
1681gatcttatct cgagatcaca ccgagcagag tcatcttgga tggtggggac agactggtgc
1741tcccctgcaa ccagagtgtg gtggtgggga gctgggggct ggaggtgtcc gtgtctgcca
1801acgccaatgt caccgtcacc atccagggct ccatagcctt tgtcatcctc atccacctct
1861acaaaaagcc ggcgcccttc cagcgacacc acctgggttt ctacattgcc aacagcgagg
1921gcctttccag caactgccac ggactgctgg gtcagttcct gaatcaggat gccagactca
1981cagaagaccc tgcagggccc agccagaacc tcactcaccc tctgctcctt caggtgggag
2041aggggcctga ggccgtccta acagtgaaag gccaccaagt cccagtggtc tggaagcaaa
2101ggaagattta caacggggaa gagcagatag actgctggtt tgccaggaac aatgccgcca
2161aactgattga cggggagtac aaggattacc tggcatccca tccatttgac acagggatga
2221cacttggcca gggaatgtcc agggagctct gcccaacttt cttgtacaaa gtggttggta
2281agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
2341ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)