Construct: ORF ccsbBroad304_09461

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017178.1_s304c1, BRDN0000404074
Derived from:
ccsbBroadEn_09461
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CLRN3 (119467)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09461
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 119467 CLRN3 clarin 3 NM_152311.5 99.8% 100% 111A>G
2 human 119467 CLRN3 clarin 3 XM_011539274.2 73.3% 73.4% 111A>G;228_229ins180
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
744
ORF length:
678
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc taccacaaag aagacattga tgttcttatc aagctttttc accagccttg
121ggtccttcat tgtaatttgc tctattcttg ggacacaagc atggatcacc agtacgattg
181ctgttagaga ctctgcttca aatgggagca ttttcatcac ttacggactt tttcgtgggg
241agagtagtga agaattgagt cacggacttg cagaaccaaa gaaaaagttt gcagttttag
301agatactgaa taattcttcc caaaaaactc tgcattcggt gactatcctg ttcctggtcc
361tgagtttgat cacgtcgctg ctgagctctg ggtttacctt ctacaacagc atcagcaacc
421cttaccagac attcctgggg ccgacggggg tgtacacctg gaacgggctc ggtgcatcct
481tcgtttttgt gaccatgata ctgtttgtgg cgaacacgca gtccaaccaa ctctccgaag
541agttgttcca aatgctttac ccggcaacca ccagtaaagg aacgacccac agttacggat
601actcgttctg gctcatactg ctcgtcattc ttctaaatat agtcactgta accatcatca
661ttttctacca gaaggccaga taccagcgga agcaggagca gagaaagcca atggaatatg
721ctccaaggga cggaatttta ttctgcccaa ctttcttgta caaagtggtt ggtaagccta
781tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
841gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)

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