Construct: ORF ccsbBroad304_09796

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000890.1_s304c1, BRDN0000401815
Derived from:
ccsbBroadEn_09796
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NLRP7 (199713)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09796
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 199713 NLRP7 NLR family pyrin domain con... NM_001127255.1 99.8% 99.7% (many diffs)
2 human 199713 NLRP7 NLR family pyrin domain con... XM_006723075.3 99.8% 99.7% (many diffs)
3 human 199713 NLRP7 NLR family pyrin domain con... XM_006723076.3 99.8% 99.7% (many diffs)
4 human 199713 NLRP7 NLR family pyrin domain con... XM_011526599.2 99.8% 99.7% (many diffs)
5 human 199713 NLRP7 NLR family pyrin domain con... XM_011526596.2 97.1% 97% (many diffs)
6 human 199713 NLRP7 NLR family pyrin domain con... NM_139176.3 97.1% 97% (many diffs)
7 human 199713 NLRP7 NLR family pyrin domain con... NM_206828.3 94.3% 94.2% (many diffs)
8 human 199713 NLRP7 NLR family pyrin domain con... XM_011526601.2 91.8% 91.7% (many diffs)
9 human 199713 NLRP7 NLR family pyrin domain con... XR_935761.1 79.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3180
ORF length:
3111
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gacatcgccc cagctagagt ggactctgca gacccttctg gagcagctga
121acgaggatga attaaagagt ttcaaatccc ttttatgggc ttttcccctc gaagacgtgc
181tacagaagac cccatggtct gaggtggaag aggctgatgg caagaaactg gcagaaattc
241tggtcaacac ctcctcagaa aattggataa ggaatgcgac tgtgaacatc ttggaagaga
301tgaatctcac ggaattgtgt aagatggcaa aggctgagat gatggaggac ggacaggtgc
361aagaaataga taatcctgag ctgggagatg cagaagaaga ctcggagtta gcaaagccag
421gtgaaaagga aggatggaga aattcaatgg agaaacaatc tttggtctgg aagaacacct
481tttggcaagg agacattgac aatttccatg acgacgtcac tctgagaaac caacggttca
541ttccattctt gaatcccaga acacccagga agctaacacc ttacacggtg gtgctgcacg
601gccccgcagg cgtggggaaa accacgctgg ccaaaaagtg tatgctggac tggacagact
661gcaacctcag cccgacgctc agatacgcgt tctacctcag ctgcaaggag ctcagccgca
721tgggcccctg cagttttgca gagctgatct ccaaagactg gcctgaattg caggatgaca
781ttccaagcat cctagcccaa gcacagagaa tcctgttcgt ggtcgatggc cttgatgagc
841tgaaagtccc acctggggcg ctgatccagg acatctgcgg ggactgggag aagaagaagc
901cggtgcccgt cctcctgggg agtttgctga agaggaagat gttacccagg gcagccttgc
961tggtcaccac gcggcccagg gcactgaggg acctccggat cctggcgcag cagccgatct
1021acgtaagggt ggagggcttc ctggaggagg acaggagggc ctatttcctg agacactttg
1081gagacgagga ccaagccatg cgtgcctttg agctaatgag gagcaacgcg gccctgttcc
1141agctgggctc ggcccccgcg gtgtgctgga ttgtgtgcac gactctgaag ctgcagatgg
1201agaaggggga ggacccggtc cccacctgcc tcacccgcac ggggctgttc ctgcgtttcc
1261tctgcagccg gttcccgcag ggcgcacagc tgcggggcgc gctgcggacg ctgagcctcc
1321tggccgcgca gggcctgtgg gcgcagatgt ccgtgttcca ccgagaggac ctggaaaggc
1381tcggggtgca ggagtccgac ctccgtctgt tcctggacgg agacatcctc cgccaggaca
1441gagtctccaa aggctgctac tccttcatcc acctcagctt ccagcagttt ctcactgccc
1501tgttctacac cctggagaag gaggaggggg aggacaggga cggccacgcc tgggacatcg
1561gggacgtaca gaagctgctt tccggagaag aaagactcaa gaaccccgac ctgattcaag
1621taggacactt cttattcggc ctcgctaacg agaagagagc caaggagttg gaggccactt
1681ttggctgccg gatgtcaccg gacatcaaac aggaattgct gcaatgcaaa gcacatcttc
1741atgcaaataa gcccttatcc gtgaccgacc tgaaggaggt cttgggctgc ctgtatgagt
1801ctcaggagga ggagctggcg aaggtggtgg tggccccgtt caaggaaatt tctattcacc
1861tgacaaatac ttctgaagtg atgcattgtt ccttcagcct gaagcattgt caagacttgc
1921agaaactctc actgcaggta gcaaaggggg tgttcctgga gaattacatg gattttgaac
1981tggacattga atttgaaagg tgcacttacc taaccattcc gaactgggct cggcaggatc
2041ttcgctctct tcgcctctgg acagatttct gctctctctt cagctcaaac agcaacctca
2101agtttctgga agtgaaacaa agcttcctga gtgactcttc tgtgcggatt ctttgtgacc
2161acgtaacccg tagcacctgt catctgcaga aagtggagat taaaaacgtc acccctgaca
2221ccgcgtaccg ggacttctgt cttgctttca ttgggaagaa gaccctcacg cacctgaccc
2281tggcagggca catcgagtgg gaacgcacga tgatgctgat gctgtgtgac ctgctcagaa
2341atcataaatg caacctgcag tacctgaggt tgggaggtca ctgtgccacc ccggagcagt
2401gggctgaatt cttctatgtc ctcaaagcca accagtccct gaagcacctg cgtctctcag
2461ccaatgtgct cctggatgag ggtgccatgt tgctgtacaa gaccatgaca cgcccaaaac
2521acttcctgca gatgttgtcg ttggaaaact gtcgtcttac agaagccagt tgcaaggacc
2581ttgctgctgt cttggttgtc agcaagaagc tgacacacct gtgcttggcc aagaacccca
2641ttggggatac aggggtgaag tttctgtgtg agggcttgag ttaccctgat tgtaaactgc
2701agaccttggt gttacagcaa tgcagcataa ccaagcttgg ctgtagatac ctctcagagg
2761cgctccaaga agcctgcagc ctcacaaacc tggacttgag tatcaaccag atagctcgtg
2821gattgtggat tctctgtcag gcgttagaga atccaaactg taacctaaaa cacctacgcc
2881tctggagctg ctccctcatg cctttctatt gtcagcatct tggatctgct ctcctcagca
2941atcagaagct tgaaactctg gacctgggcc agaatcattt gtggaagagt ggcataatta
3001agctctttgg ggttctaaga caaagaactg gatccttgaa gatactcagg ttgaagacct
3061atgaaactaa tttggaaatc aagaagctgt tggaggaagt gaaagaaaag aatcccaagc
3121tgactattga ttgcaatgct tccggggcaa cggcacctcc gtgctgtgac tttttttgct
3181tgccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
3241attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
3301ggatta

Download FASTA (ORF) (Full)

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