Construct: ORF ccsbBroad304_09803

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008435.1_s304c1, BRDN0000408176
Derived from:
ccsbBroadEn_09803
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TCTEX1D1 (200132)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09803
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 200132 TCTEX1D1 Tctex1 domain containing 1 NM_152665.3 99.8% 99.4% 427C>A
2 human 200132 TCTEX1D1 Tctex1 domain containing 1 XM_017000566.1 99.8% 99.4% 427C>A
3 human 200132 TCTEX1D1 Tctex1 domain containing 1 XM_011540933.2 82% 77% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
606
ORF length:
537
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gatgatgtca gacaatgcta aaggcagagc agctcattca tggaagaaaa
121gagggagtat ttcttctcta agtaatcatg aattttggcg aaaggaaatt catgggcgca
181tcaaagattc tatgagtact gtgtcttata tggaagaacc cagtcagcgt gatgatatct
241ctcgccttac agttcagatg gaaaacacct atcagttggg tcctcccaaa cattttcctg
301tggtcaccgt caatcatatt ttgaaagatg tagtaaccag ctatctacaa gtagaagaat
361atgaaccaga gctctgtaga cagatgacta aaaccatttc tgaggttatt aaagcccagg
421tcaaggactt gatgattcca cggtataaac taattgtgat tgttcacatt ggacaactga
481acaggcagag cataattatt ggaagcagat gcctctggga tcctaaaagt gatacctttt
541catcttatgt tttcagaaat tcttctctct tcgctcttgc aaatgtctat gcagtttacc
601ttgagttgcc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
661gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
721acctctggat ta

Download FASTA (ORF) (Full)