Construct: ORF ccsbBroad304_09878

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012325.1_s304c1, BRDN0000406869
Derived from:
ccsbBroadEn_09878
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
LRWD1 (222229)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09878
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 222229 LRWD1 leucine rich repeats and WD... NM_152892.3 99.9% 93.3% 1815G>A
2 human 222229 LRWD1 leucine rich repeats and WD... NM_001317721.1 76.4% 69.8% 0_1ins456;1359G>A
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1878
ORF length:
1812
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg ccccctctcg gcgcggctgc taatgcagcg cgggcgcccc aagagcgacc
121ggctggggaa gatccggagt ctggacctgt caggattgga gctgctttcc gagcacctgg
181accccaaact cctgtgccgc ctgacgcagc tgcaggagct tgacctgtct aacaaccacc
241tggagacgct gccggacaac ctgggcctgt cccacctgcg tgtcctccgc tgcgccaaca
301accagctggg ggatgttact gccttgtgcc agttccccaa gctcgaggaa ctcagcctgg
361agggcaaccc cttcctgacg gtcaatgaca acctgaaagt ctcctttctc ctgcccacgc
421tccgtaaggt caatggcaag gatgcgtcct caacttactc tcaggtggag aacctgaatc
481gggagctgac cagcagggtc acagctcact gggagaagtt catggccaca ctgggtcctg
541aagaggaggc tgagaaggcc caggcggact ttgtgaagtc ggctgtcagg gatgtccgct
601acgggcccga gtccctcagc gagttcaccc agtggcgggt gcggatgatc tctgaggagc
661tggtggccgc cagtaggacc caggtgcaaa aggctaacag cccagagaag cccccagaag
721ctggagctgc ccacaagccc agggccagac tggcggcctt gaaacggcca gacgacgtcc
781cactcagcct ctctcccagc aagcgggcgt gtgcctcccc gtcggcccag gtggagggca
841gccctgtggc aggctccgat ggcagccagc ctgctgtgaa gctggagccc ctgcacttcc
901tgcagtgcca cagcaagaac aacagccccc aggacctcga gacccagctg tgggcctgtg
961ccttcgagcc ggcctgggag gagggggcca catcccagac cgtggccacg tgcggcgggg
1021aggctgtgtg cgtaattgat tgccagacgg gcatcgtgct ccacaagtac aaggcacccg
1081gcgaggagtt cttttctgtg gcctggaccg ctctgatggt ggtcacacag gctggccaca
1141agaagcgctg gagtgtgctg gcggctgcag gcctacgggg cctggtccgg ctgctgcacg
1201tgcgtgccgg cttctgctgc ggggtcatcc gagcccacaa gaaggccatc gccaccctgt
1261gcttcagccc cgcccacgag acccatctct tcacggcctc ctatgacaag cggatcatcc
1321tctgggacat cggggtgccc aaccaggact acgaattcca ggccagccag ctgctcacac
1381tggacaccac ctctatcccc ctgcgcctct gccctgtcgc ctcctgcccg gacgcccgcc
1441tgctggccgg ctgcgagggc ggctgctgct gctgggacgt gcggctggac cagccccaaa
1501agaggagggt gtgtgaagtg gaattcgtct tctctgaggg ctccgaggca tctggacgga
1561gagtggatgg gctggcattt gtgaatgagg acatcgtggc ctccaagggg agcggcctgg
1621gcaccatctg cctgtggagc tggaggcaga cgtggggggg ccggggcagc cagtccacgg
1681tggcagtggt ggtcctggcg cggctgcaat ggtcgtccac cgagttggcc tacttctcgc
1741tcagcgcctg ccctgataag gggattgtgc tctgtgggga tgaggagggc aacgtgtggc
1801tctacgacgt cagcaacatc ctgaagcagc cacccctgct gccggcagcc ctgcaggccc
1861ccacacagat cctgaagtga ccccagccct gggcccttgg ccaggtggtg accaagacca
1921tggtgaacac agtggtggcc aatgcctcct tcacctacct caccgccctg acggactcca
1981acatcgtagc catctggggg aggatgtacc caactttctt gtacaaagtg gttggtaagc
2041ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
2101ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)