Construct: ORF ccsbBroad304_10203

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014140.1_s304c1, BRDN0000460668
Derived from:
ccsbBroadEn_10203
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RELL1 (768211)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10203
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 768211 RELL1 RELT like 1 NM_001085399.2 99.8% 100% 387G>A
2 human 768211 RELL1 RELT like 1 NM_001085400.2 99.8% 100% 387G>A
3 human 768211 RELL1 RELT like 1 XR_002959758.1 74.1% (many diffs)
4 human 768211 RELL1 RELT like 1 XM_017008590.2 53% 52.3% 0_1ins379;4_5insAG;6G>A
5 mouse 100532 Rell1 RELT-like 1 NM_145923.4 81.9% 87.8% (many diffs)
6 mouse 100532 Rell1 RELT-like 1 XM_006503621.3 81.9% 87.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
882
ORF length:
813
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggctccgcgg gcactcccgg ggtccgccgt cctagccgct gctgtcttcg
121tgggaggcgc cgtgagttcg ccgctggtgg ctccggacaa tgggagcagc cgcacattgc
181actccagaac agagacgacc ccgtcgccca gcaacgatac tgggaatgga cacccagaat
241atattgcata cgcgcttgtc cctgtgttct ttatcatggg tctctttggc gtcctcattt
301gccacctgct taagaagaaa ggctatcgtt gtacaacaga agcagagcaa gatatcgaag
361aggaaaaggt tgaaaagata gaattgaatg acagtgtgaa tgaaaacagt gacactgttg
421ggcaaatcgt ccactacatc atgaaaaatg aagcaaatgc tgatgtctta aaggcgatgg
481tagcagataa cagcctgtat gatcctgaaa gccccgtgac ccccagcaca ccagggagcc
541cgccagtgag tcctgggcct ttgtcaccag gggggacgcc agggaagcac gtctgtggcc
601atcatctgca tacggtgggc ggtgttgtcg agagggatgt gtgtcatcgg tgtaggcaca
661agcggtggca ctttataaag cccactaaca agtccagaga gagcagacca cggcgccaag
721gcgaggtcac ggtcctttct gttggcagat ttagagttac aaaagtggag cacaagtcaa
781accagaagga acggagaagc ctgatgtctg ttagtggggc tgaaaccgtc aatggggagg
841tgccggcaac acctgtgaag agagaacgca gtggcacaga gttgccaact ttcttgtaca
901aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
961ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)