Construct: ORF ccsbBroad304_10228

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009706.1_s304c1, BRDN0000405439
Derived from:
ccsbBroadEn_10228
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CMAHP (8418)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10228
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8418 CMAHP cytidine monophospho-N-acet... NR_027626.1 41.2% 1_531del;1273_1795del
2 human 8418 CMAHP cytidine monophospho-N-acet... NR_002174.2 29% (many diffs)
3 mouse 12763 Cmah cytidine monophospho-N-acet... NM_001111110.2 37.4% 35.6% (many diffs)
4 mouse 12763 Cmah cytidine monophospho-N-acet... NM_001284519.1 37.4% 35.6% (many diffs)
5 mouse 12763 Cmah cytidine monophospho-N-acet... NM_007717.5 37.4% 35.6% (many diffs)
6 mouse 12763 Cmah cytidine monophospho-N-acet... XM_011244265.2 37.2% 35.4% (many diffs)
7 mouse 12763 Cmah cytidine monophospho-N-acet... XM_011244266.2 37.2% 35.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
810
ORF length:
741
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggatgaaaac aacggacttt tgcttttaga actgaatcct cctaaccctt
121gggacttaca gcccagatct cctgaagagt tggcttttgg agaagtacag ataacatatc
181tcactcatgc ctgcatggac ctcaagttag gagacaagag aatggtgttt gacccttggt
241taatcggtcc tgcttttgcc cgtggatggt ggttgctcca tgagcctcca tctgattggc
301tggagaggct gtgccaggca gacctcattt acatcagtca tctgcactca gaccacctga
361gttaccccac actgaaaaag cttgctggga gaagaccaga tattcccatt tatgttggaa
421acacagaaag gcctgtattt tggaatctga atcagagcgg tgtccagttg actaatatca
481atgtcgtgcc atttggaata tggcagcagg tggacaaaaa tcttcgattc atgatcttga
541tggacggtgt tcatcctgag atggacactt gcattattgt ggagtacaaa ggtcataaaa
601tactcaatat agtagactgc accagaccca atgggggaag gctgcctatg aaggttgctc
661taatgatgag tgattttgct ggaggagcat caggctttcc aatgactttc agtggtggaa
721aatttacggg taatattttg tatgaaagtg ataccaagta tcacgcatgg cacattgcta
781aatgctgtaa gagtaaatac aaatgtaatt tgccaacttt cttgtacaaa gtggttggta
841agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
901ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)