Construct: ORF ccsbBroad304_10395

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000141.1_s304c1, BRDN0000398664
Derived from:
ccsbBroadEn_10395
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MIR4435-2HG (541471)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10395
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 112597 CYTOR cytoskeleton regulator RNA NR_024206.2 28.2% (many diffs)
2 human 112597 CYTOR cytoskeleton regulator RNA NR_146460.1 26.7% (many diffs)
3 human 541471 MIR4435-2HG MIR4435-2 host gene NR_024373.2 25.8% 1_325del;482_603del
4 human 112597 CYTOR cytoskeleton regulator RNA NR_024205.3 22.5% (many diffs)
5 human 112597 CYTOR cytoskeleton regulator RNA NR_146461.1 20.9% (many diffs)
6 human 112597 CYTOR cytoskeleton regulator RNA NR_024204.2 17.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
222
ORF length:
156
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac agacactgaa aatcacgact catccccctc cagcacctct acctgttgcc
121cgccgatcac agccggaatg cagctgaaag attccctggg gcctggttcc aactgcccac
181tgtggactct gaggcctctg catttgcggg tggtctgcct gtgcccaact ttcttgtaca
241aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
301ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)