Construct: ORF ccsbBroad304_10730

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014652.1_s304c1, BRDN0000401783
Derived from:
ccsbBroadEn_10730
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDX1 (1044)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10730
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1044 CDX1 caudal type homeobox 1 NM_001804.3 56.9% 55% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
531
ORF length:
462
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gtgctggaca aggattcgcc cgggcacacc gtcctcgccc ggagcgcaga
121ggcggacgcc ctacgagtgg atgcggcgca gcgtggcggc cggaggcggc ggtggcagcg
181gtaagactcg gaccaaggac aagtaccgcg tggtctacac cgaccaccaa cgcctggagc
241tggagaagga gtttcattac agccgttaca tcacaatccg gcggaaatca gagctggctg
301ccaatctggg gctcactgaa cggcaggtga agatctggtt ccaaaaccgg cgggcaaagg
361agcgcaaagt gaacaagaag aaacagcagc agcaacagcc cccacagccg ccgatggccc
421acgacatcac ggccacccca gccgggccat ccctgggggg cctgtgtccc agcaacacca
481gcctcctggc cacctcctct ccaatgcctg tgaaagagga gtttctgcca ttgccaactt
541tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
601agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)